| QTL Map Information |
|---|
| Chromosome: | 2 |
| QTL Peak Location: | 39.59 (cM) |
| QTL Span: | 39.59-39.59 (cM)
47.0-47.0 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs81313243 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Pigs were White Duroc x Erhualian F2, Chinese Sutai, commercial Duroc x (Landrace x Large White, Erhualian, and Laiwu. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina PorcineSNP60 BeadChip and analyzed for blood lipid traits. In addition, eight SNPs and one indel in APOB were genotyped. |
| Analysis: | A mixed model was used. |
| Software: | GenABEL in R |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Yang H, Huang X, Zeng Z, Zhang W, Liu C, Fang S, Huang L, Chen C |
| Affiliation: | Key Laboratory for Animal Biotechnology of Jiangxi Province and the Ministry of Agriculture of China, Jiangxi Agricultural University, 330045, Nanchang, China |
| Title: | Genome-Wide Association Analysis for Blood Lipid Traits Measured in Three Pig Populations Reveals a Substantial Level of Genetic Heterogeneity |
| Journal: | PloS one, 2015, 10(6): e0131667 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | Meta-analysis |
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