Release 56
(Apr 24, 2025)

QTL 64753 Description:

 Trait Information
Trait name: Lumbar vertebra number Vertebrate Trait Ontology: Lumbar vertebra quantity
Reported name: (n/a) Product Trait Ontology: n/a
Symbol: LVNUM Clinical Measurement Ontology: Lumbar vertebrae number
 QTL Map Information
Chromosome:9
QTL Peak Location:38.09 (cM)
QTL Span:37.66-38.53 (cM)
36.8-37.6 (Mbp)
Upper, "Suggestive":rs80988189
Upper, "Significant":n/a
Peak:rs81300372
Lower, "Significant":n/a
Lower, "Suggestive":rs81419835
Marker type:SNP
Analysis type:QTL
Model tested:Mendelian
Test base:n/a
Threshold significance level:Suggestive
VARIANCE0.86
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Landrace x Duroc x Yorkshire pigs.
     Breeds associated:
    Design:Animals were genotyped using the Illumina PorcineSNP60 BeadChip and analyzed for vertebra number. A total of 41,148 SNPs were used for analysis.
    Analysis:Bayesian analyses were conducted.
    Software:GenSel, SAS
    Notes: 
    Links:Edit

     Reference
    Authors:Rohrer GA, Nonneman DJ, Wiedmann RT, Schneider JF
    Affiliation:United States Department of Agriculture, Agricultural Research Service,, U.S. Meat Animal Research Center, Clay Center, NE, 68933, USA
    Title:A study of vertebra number in pigs confirms the association of vertnin and reveals additional QTL
    Journal:BMC genetics, 2015, 16(1): 129
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #26518887
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  • Cite this Data:

    Animal QTLdb: QTL64753 was published in 2015, and was curated into QTLdb on 2015-12-09. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:64753

     

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