A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
EPHB3 location ⇒ 13:92658668-92658516   FP236536,CH242-57J21,13:92648587-92659732
(Clone quality: bE57J21 on chr=13; Num_of_Contigs=12; )
EPHB4   ENSSSCG00000007675 3:6959526-6977312    
EPHB6 ENSSSCG00000016473 18:6180018-6185856    
EPHB6 location ⇒ 18:6180259-6180123   CU928245,CH242-100K20,18:6180123-6237420
(Clone quality: bE100K20 on chr=18; Num_of_Contigs=3; )
EPHB6 location ⇒ 18:6180771-6180690   CU928245,CH242-100K20,18:6180123-6237420
(Clone quality: bE100K20 on chr=18; Num_of_Contigs=3; )
EPHX1 ENSSSCG00000010853 10:13958968-13974573   CU694604,CH242-320F1,10:13942132-14005936
(Clone quality: bE320F1 on chr=10; Num_of_Contigs=3; )
EPHX1 location ⇒ 10:13961655-13961836   CU694604,CH242-320F1,10:13942132-14005936
(Clone quality: bE320F1 on chr=10; Num_of_Contigs=3; )
EPHX1 location ⇒ 10:13968016-13968246   CU694604,CH242-320F1,10:13942132-14005936
(Clone quality: bE320F1 on chr=10; Num_of_Contigs=3; )
EPHX1 location ⇒ 10:13969513-13969722   CU694604,CH242-320F1,10:13942132-14005936
(Clone quality: bE320F1 on chr=10; Num_of_Contigs=3; )
EPHX1 location ⇒ 10:13974092-13974512   CU694604,CH242-320F1,10:13942132-14005936
(Clone quality: bE320F1 on chr=10; Num_of_Contigs=3; )
EPHX2 ENSSSCG00000009666 14:11336349-11412305    
EPHX2 location ⇒ 14:11367473-11367636   CU633626,CH242-119C13,14:11316689-11386749
(Clone quality: bE119C13 on chr=14; Num_of_Contigs=3; )
EPHX2 location ⇒ 14:11369139-11369332   CU633626,CH242-119C13,14:11316689-11386749
(Clone quality: bE119C13 on chr=14; Num_of_Contigs=3; )
EPHX2 location ⇒ 14:11372087-11372211   CU633626,CH242-119C13,14:11316689-11386749
(Clone quality: bE119C13 on chr=14; Num_of_Contigs=3; )
EPHX2 location ⇒ 14:11391625-11391739   CU633626,CH242-119C13,14:11386850-11482027
(Clone quality: bE119C13 on chr=14; Num_of_Contigs=3; )
EPIM ENSSSCG00000009747 14:24381184-24414065   CU468532,CH242-32J1,14:24369564-24416537
(Clone quality: bE32J1 on chr=14; Num_of_Contigs=7; )
EPM2A   ENSSSCG00000004122 1:20711661-20795798    
EPN3   ENSSSCG00000017564 12:24160771-24166981   CU928099,CH242-256B20,12:24158079-24172992
(Clone quality: bE256B20 on chr=12; Num_of_Contigs=9; )
EPO ENSSSCG00000007673 3:6915774-6918202   FP102710,CH242-46P3,3:6895448-6951193
(Clone quality: bE46P3 on chr=3; Num_of_Contigs=3; )
EPO ENSSSCG00000013618 2:52278835-52284078   CU855518,CH242-272A5,2:52278123-52289160
(Clone quality: bE272A5 on chr=2; Num_of_Contigs=10; )
EPO ENSSSCG00000017630 12:32338140-32350617   CU914501,CH242-205G24,12:32336144-32369784
(Clone quality: bE205G24 on chr=12; Num_of_Contigs=21; )
EPO location ⇒ 3:6915774-6915905   FP102710,CH242-46P3,3:6895448-6951193
(Clone quality: bE46P3 on chr=3; Num_of_Contigs=3; )
EPO location ⇒ 3:6916445-6916588   FP102710,CH242-46P3,3:6895448-6951193
(Clone quality: bE46P3 on chr=3; Num_of_Contigs=3; )
EPO location ⇒ 3:6917133-6917314   FP102710,CH242-46P3,3:6895448-6951193
(Clone quality: bE46P3 on chr=3; Num_of_Contigs=3; )
EPO location ⇒ 3:6917481-6918202   FP102710,CH242-46P3,3:6895448-6951193
(Clone quality: bE46P3 on chr=3; Num_of_Contigs=3; )
EPOR ENSSSCG00000013618 2:52278835-52284078   CU855518,CH242-272A5,2:52278123-52289160
(Clone quality: bE272A5 on chr=2; Num_of_Contigs=10; )
EPOR location ⇒ 2:52279012-52279261   CU855518,CH242-272A5,2:52278123-52289160
(Clone quality: bE272A5 on chr=2; Num_of_Contigs=10; )
EPOR location ⇒ 2:52280611-52280789   CU855518,CH242-272A5,2:52278123-52289160
(Clone quality: bE272A5 on chr=2; Num_of_Contigs=10; )
EPOR location ⇒ 2:52280864-52281025   CU855518,CH242-272A5,2:52278123-52289160
(Clone quality: bE272A5 on chr=2; Num_of_Contigs=10; )
EPOR location ⇒ 2:52283466-52284235   CU855518,CH242-272A5,2:52278123-52289160
(Clone quality: bE272A5 on chr=2; Num_of_Contigs=10; )
EPRS   ENSSSCG00000010821 10:9627080-9694371    
EPS15 ENSSSCG00000013857 2:60919752-60998503   CU694762,CH242-123E16,2:60899482-61017915
(Clone quality: bE123E16 on chr=2; Num_of_Contigs=2; )
EPS15 ENSSSCG00000003872 6:114494435-114633375    
EPS15 location ⇒ 6:114568579-114568783   CU657962,CH242-239M20,6:114446586-114584701
(Clone quality: bE239M20 on chr=6; Num_of_Contigs=3; )
EPS15 location ⇒ 6:114570834-114570951   CU657962,CH242-239M20,6:114446586-114584701
(Clone quality: bE239M20 on chr=6; Num_of_Contigs=3; )
EPS15 location ⇒ 6:114571096-114571190   CU657962,CH242-239M20,6:114446586-114584701
(Clone quality: bE239M20 on chr=6; Num_of_Contigs=3; )
EPS15 location ⇒ 6:114575652-114575789   CU657962,CH242-239M20,6:114446586-114584701
(Clone quality: bE239M20 on chr=6; Num_of_Contigs=3; )
EPS15L1   ENSSSCG00000013857 2:60919752-60998503   CU694762,CH242-123E16,2:60899482-61017915
(Clone quality: bE123E16 on chr=2; Num_of_Contigs=2; )
EPS8   ENSSSCG00000000600 5:54380540-54449604   CU655983,CH242-226N9,5:54333462-54523626
(Clone quality: bE226N9 on chr=5; Num_of_Contigs=1; )
EPS8L2   ENSSSCG00000012848 2:213774-228421   FP015900,CH242-40P17,2:201823-266668
(Clone quality: bE40P17 on chr=2; Num_of_Contigs=6; )
EPS8L3   ENSSSCG00000006820 4:114932609-114947640   CU861601,CH242-205N8,4:114851445-114996470
(Clone quality: bE205N8 on chr=4; Num_of_Contigs=4; )
EPX ENSSSCG00000017630 12:32338140-32350617   CU914501,CH242-205G24,12:32336144-32369784
(Clone quality: bE205G24 on chr=12; Num_of_Contigs=21; )
EPX location ⇒ 12:32338948-32338733   CU914501,CH242-205G24,12:32336144-32369784
(Clone quality: bE205G24 on chr=12; Num_of_Contigs=21; )
EPX location ⇒ 12:32339753-32339511   CU914501,CH242-205G24,12:32336144-32369784
(Clone quality: bE205G24 on chr=12; Num_of_Contigs=21; )
EPX location ⇒ 12:32482242-32482484   CU571372,CH242-73D9,12:32463161-32524857
(Clone quality: bE73D9 on chr=12; Num_of_Contigs=4; )
EPX location ⇒ 12:32483047-32483262   CU571372,CH242-73D9,12:32463161-32524857
(Clone quality: bE73D9 on chr=12; Num_of_Contigs=4; )
EPYC   ENSSSCG00000000918 5:86886211-86922512    
ERAL1   ENSSSCG00000017776 12:42814928-42820625   FP236132,CH242-148L9,12:42803055-42852030
(Clone quality: bE148L9 on chr=12; Num_of_Contigs=4; )
ERAP1 ENSSSCG00000014171 2:92440844-92468725    
ERAP2 ENSSSCG00000014172 2:92604759-92652037    
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-29

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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