A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
PG-2   location ⇒ 13:26044715-26044641   FP102065,CH242-145E9,13:26011061-26058464
(Clone quality: bE145E9 on chr=13; Num_of_Contigs=12; )
PG-2   location ⇒ 13:26044977-26044870   FP102065,CH242-145E9,13:26011061-26058464
(Clone quality: bE145E9 on chr=13; Num_of_Contigs=12; )
PG-2   location ⇒ 13:26045579-26045381   FP102065,CH242-145E9,13:26011061-26058464
(Clone quality: bE145E9 on chr=13; Num_of_Contigs=12; )
PGAM2 ENSSSCG00000016720 18:47352624-47354954   FP236704,CH242-239B21,18:47321386-47379618
(Clone quality: bE239B21 on chr=18; Num_of_Contigs=4; )
PGAM2 location ⇒ 18:47352701-47353121   FP236704,CH242-239B21,18:47321386-47379618
(Clone quality: bE239B21 on chr=18; Num_of_Contigs=4; )
PGAM2 location ⇒ 18:47353230-47353413   FP236704,CH242-239B21,18:47321386-47379618
(Clone quality: bE239B21 on chr=18; Num_of_Contigs=4; )
PGAM2 location ⇒ 18:47354743-47354940   FP236704,CH242-239B21,18:47321386-47379618
(Clone quality: bE239B21 on chr=18; Num_of_Contigs=4; )
PGAP1   ENSSSCG00000016073 15:94463460-94507064    
PGAP2   ENSSSCG00000014793 9:5655371-5655595   CU914666,CH242-341A4,9:5654753-5657324
(Clone quality: bE341A4 on chr=9; Num_of_Contigs=11; )
PGAP3   ENSSSCG00000017502 12:20622594-20637983   CU640399,CH242-251F23,12:20578579-20644206
(Clone quality: bE251F23 on chr=12; Num_of_Contigs=5; )
PGBD1   ENSSSCG00000001207 7:23696613-23713921 CU062578,CH242-485A8,7:23636539-23857828
(Clone quality: bE485A8 on chr=7; Num_of_Contigs=2; ) 		 
PGC   ENSSSCG00000001625 7:42469364-42479970    
PGD ENSSSCG00000005031 1:190214029-190221736   CU571369,CH242-523L1,1:190155010-190315370
(Clone quality: bE523L1 on chr=1; Num_of_Contigs=2; )
PGD ENSSSCG00000003402 6:47483771-47500685   CU929886,CH242-214O13,6:47459319-47565046
(Clone quality: bE214O13 on chr=6; Num_of_Contigs=3; )
PGD ENSSSCG00000009194 8:107524790-107542578   CU951443,CH242-413P10,8:107523499-107544784
(Clone quality: bE413P10 on chr=8; Num_of_Contigs=10; )
PGD location ⇒ 6:47485247-47485417   CU929886,CH242-214O13,6:47459319-47565046
(Clone quality: bE214O13 on chr=6; Num_of_Contigs=3; )
PGD location ⇒ 6:47489462-47489581   CU929886,CH242-214O13,6:47459319-47565046
(Clone quality: bE214O13 on chr=6; Num_of_Contigs=3; )
PGD location ⇒ 6:47495427-47495620   CU929886,CH242-214O13,6:47459319-47565046
(Clone quality: bE214O13 on chr=6; Num_of_Contigs=3; )
PGD location ⇒ 6:47499949-47500075   CU929886,CH242-214O13,6:47459319-47565046
(Clone quality: bE214O13 on chr=6; Num_of_Contigs=3; )
PGDS ENSSSCG00000009194 8:107524790-107542578   CU951443,CH242-413P10,8:107523499-107544784
(Clone quality: bE413P10 on chr=8; Num_of_Contigs=10; )
PGDS location ⇒ 8:11935709-11935806   CU856070,CH242-92I12,8:11923339-11942453
(Clone quality: bE92I12 on chr=8; Num_of_Contigs=6; )
PGDS location ⇒ 8:6541216-6541325   CU695151,CH242-237E23,8:6541200-6598109
(Clone quality: bE237E23 on chr=8; Num_of_Contigs=6; )
PGDS location ⇒ 8:818312-818219   CU930000,CH242-128J21,8:814226-819472
(Clone quality: bE128J21 on chr=8; Num_of_Contigs=8; )
PGDS location ⇒ 8:9988151-9988082   CU915681,CH242-246A11,8:9988068-10054815
(Clone quality: bE246A11 on chr=8; Num_of_Contigs=4; )
PGF ENSSSCG00000002376 7:106403623-106416598   CT797477,CH242-140C11,7:106390600-106458378
(Clone quality: bE140C11 on chr=7; Num_of_Contigs=2; )
PGGT1B   ENSSSCG00000014215 2:108047669-108226922    
PGK1 ENSSSCG00000012440 X:61625590-61764471    
PGK1 location ⇒ X:61621777-61621935   CU638862,CH242-477H4,X:61621217-61625220
(Clone quality: bE477H4 on chr=X; Num_of_Contigs=10; )
PGK1 location ⇒ X:61761634-61761816 CU407109,CH242-173B9,X:61749277-61827164
(Clone quality: bE173B9 on chr=X; Num_of_Contigs=3; ) 		 
PGK1 location ⇒ X:61763086-61763266 CU407109,CH242-173B9,X:61749277-61827164
(Clone quality: bE173B9 on chr=X; Num_of_Contigs=3; ) 		 
PGK1 location ⇒ X:61764007-61764471 CU407109,CH242-173B9,X:61749277-61827164
(Clone quality: bE173B9 on chr=X; Num_of_Contigs=3; ) 		 
PGLS   ENSSSCG00000013878 2:61759954-61767912   CU861959,CH242-254K17,2:61757512-61795550
(Clone quality: bE254K17 on chr=2; Num_of_Contigs=9; )
PGLYRP location ⇒ 6:36237507-36237802   FP102354,CH242-94J5,6:36229773-36238828
(Clone quality: bE94J5 on chr=6; Num_of_Contigs=21; )
PGLYRP location ⇒ 6:36258049-36258175   FP102354,CH242-94J5,6:36256516-36261474
(Clone quality: bE94J5 on chr=6; Num_of_Contigs=21; )
PGLYRP location ⇒ 6:36258717-36258967   FP102354,CH242-94J5,6:36256516-36261474
(Clone quality: bE94J5 on chr=6; Num_of_Contigs=21; )
PGLYRP1 ENSSSCG00000003099 6:36237357-36258990    
PGLYRP1 location ⇒ 4:103495866-103495413   CU606940,CH242-153I6,4:103481415-103497382
(Clone quality: bE153I6 on chr=4; Num_of_Contigs=12; )
PGLYRP1 location ⇒ 4:103496550-103496337   CU606940,CH242-153I6,4:103481415-103497382
(Clone quality: bE153I6 on chr=4; Num_of_Contigs=12; )
PGLYRP1 location ⇒ 4:103499753-103499224   CU606940,CH242-153I6,4:103497483-103521572
(Clone quality: bE153I6 on chr=4; Num_of_Contigs=12; )
PGLYRP3 location ⇒ 4:100329166-100328381   FP085472,CH242-106M16,4:100327871-100409057
(Clone quality: bE106M16 on chr=4; Num_of_Contigs=3; )
PGLYRP3 location ⇒ 4:100338147-100338031   FP085472,CH242-106M16,4:100327871-100409057
(Clone quality: bE106M16 on chr=4; Num_of_Contigs=3; )
PGLYRP3 location ⇒ 4:100343818-100343470   FP085472,CH242-106M16,4:100327871-100409057
(Clone quality: bE106M16 on chr=4; Num_of_Contigs=3; )
PGLYRP4 ENSSSCG00000006587 4:100328917-100344000   FP085472,CH242-106M16,4:100327871-100409057
(Clone quality: bE106M16 on chr=4; Num_of_Contigs=3; )
PGLYRP4 location ⇒ 4:100329180-100328973   FP085472,CH242-106M16,4:100327871-100409057
(Clone quality: bE106M16 on chr=4; Num_of_Contigs=3; )
PGLYRP4 location ⇒ 4:100331080-100330962   FP085472,CH242-106M16,4:100327871-100409057
(Clone quality: bE106M16 on chr=4; Num_of_Contigs=3; )
PGM1 ENSSSCG00000003812 6:104917547-104979812   CU929719,CH242-211O22,6:104855552-105005170
(Clone quality: bE211O22 on chr=6; Num_of_Contigs=2; )
PGM1 location ⇒ 6:104918230-104917550   CU929719,CH242-211O22,6:104855552-105005170
(Clone quality: bE211O22 on chr=6; Num_of_Contigs=2; )
PGM1 location ⇒ 6:104924045-104923857   CU929719,CH242-211O22,6:104855552-105005170
(Clone quality: bE211O22 on chr=6; Num_of_Contigs=2; )
PGM1 location ⇒ 6:104941508-104941315   CU929719,CH242-211O22,6:104855552-105005170
(Clone quality: bE211O22 on chr=6; Num_of_Contigs=2; )
PGM1 location ⇒ 6:104979791-104979432   CU929719,CH242-211O22,6:104855552-105005170
(Clone quality: bE211O22 on chr=6; Num_of_Contigs=2; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-1000, 1001-1050, 1051-1100, 1101-1150, 1151-1200, 1201-1250, 1251-1300, 1301-1350, 1351-1400, 1401-1450, 1451-1500, 1501-1550, 1551-1600, 1601-1650, 1651-1700, 1701-1750, 1751-1800, 1801-1850, 1851-1900, 1901-1950, 1951-2000, 2001-2050, 2051-2100, 2101-2150, 2151-2200, 2201-21

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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