A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
TBX22   ENSSSCG00000012449 X:63532397-63540304   FP074891,CH242-212O17,X:63511918-63559745
(Clone quality: bE212O17 on chr=X; Num_of_Contigs=3; )
TBX3   ENSSSCG00000009865 14:37979782-37990959   CU468473,CH242-266G24,14:37966218-38017901
(Clone quality: bE266G24 on chr=14; Num_of_Contigs=4; )
TBX5 ENSSSCG00000009867 14:38174956-38223080   CU468162,CH242-68H7,14:38171969-38284462
(Clone quality: bE68H7 on chr=14; Num_of_Contigs=3; )
TBXA2R   ENSSSCG00000013487 2:48144430-48150870   CU915719,CH242-157K19,2:48050805-48153822
(Clone quality: bE157K19 on chr=2; Num_of_Contigs=5; )
TBXAS1 ENSSSCG00000016504 18:8150116-8224710    
TBXAS1 location ⇒ 18:8100406-8100158   CU928390,CH242-238M8,18:8038180-8109791
(Clone quality: bE238M8 on chr=18; Num_of_Contigs=3; )
TBXAS1 location ⇒ 18:8102820-8102653   CU928390,CH242-238M8,18:8038180-8109791
(Clone quality: bE238M8 on chr=18; Num_of_Contigs=3; )
TBXAS1 location ⇒ 18:8218021-8218171   FP236748,CH242-403P4,18:8150447-8258192
(Clone quality: bE403P4 on chr=18; Num_of_Contigs=2; )
TBXAS1 location ⇒ 18:8224391-8224710   FP236748,CH242-403P4,18:8150447-8258192
(Clone quality: bE403P4 on chr=18; Num_of_Contigs=2; )
TC ENSSSCG00000015749 15:31993420-32018200    
TC ENSSSCG00000010011 14:48302979-48320699    
TC2N   ENSSSCG00000002443 7:121253237-121302833   CU468517,CH242-262C5,7:121238948-121320950
(Clone quality: bE262C5 on chr=7; Num_of_Contigs=5; )
TCAP ENSSSCG00000017500 12:20615599-20616848   CU640399,CH242-251F23,12:20578579-20644206
(Clone quality: bE251F23 on chr=12; Num_of_Contigs=5; )
TCEA1   ENSSSCG00000006261 4:80209933-80237846   CU179651,CH242-238A10,4:80189487-80255624
(Clone quality: bE238A10 on chr=4; Num_of_Contigs=3; )
TCEA1P2 ENSSSCG00000006261 4:80209933-80237846   CU179651,CH242-238A10,4:80189487-80255624
(Clone quality: bE238A10 on chr=4; Num_of_Contigs=3; )
TCEA3 location ⇒ 6:56196982-56197041   CU929663,CH242-51A3,6:56196558-56199854
(Clone quality: bE51A3 on chr=6; Num_of_Contigs=33; )
TCEA3 location ⇒ 6:56198170-56198276   CU929663,CH242-51A3,6:56196558-56199854
(Clone quality: bE51A3 on chr=6; Num_of_Contigs=33; )
TCEA3 location ⇒ 6:56286597-56286532   CU929663,CH242-51A3,6:56285491-56287714
(Clone quality: bE51A3 on chr=6; Num_of_Contigs=33; )
TCEA3 location ⇒ 6:56340926-56340776   CU929663,CH242-51A3,6:56338453-56342631
(Clone quality: bE51A3 on chr=6; Num_of_Contigs=33; )
TCEAL1   ENSSSCG00000012532 X:82191575-82192054 CU929828,CH242-51F15,X:82033485-82193697
(Clone quality: bE51F15 on chr=X; Num_of_Contigs=1; ) 		 
TCEAL7   ENSSSCG00000012526 X:81917723-81918022   FP101968,CH242-59P14,X:81832034-81955406
(Clone quality: bE59P14 on chr=X; Num_of_Contigs=3; )
TCEAL8   ENSSSCG00000012523 X:81844630-81844983   FP101968,CH242-59P14,X:81832034-81955406
(Clone quality: bE59P14 on chr=X; Num_of_Contigs=3; )
TCEANC   ENSSSCG00000012122 X:9416816-9417880 CU207339,CH242-223P6,X:9383827-9427526
(Clone quality: bE223P6 on chr=X; Num_of_Contigs=3; ) 		 
TCEB1   ENSSSCG00000006176 4:64154542-64171424   CU210930,CH242-386B23,4:64135497-64175332
(Clone quality: bE386B23 on chr=4; Num_of_Contigs=3; )
TCEB2   ENSSSCG00000008061 3:37088181-37092413   FP104556,CH242-225P24,3:37083356-37092446
(Clone quality: bE225P24 on chr=3; Note=un_improved;)
TCERG1   ENSSSCG00000014416 2:134028906-134060885   CU462939,CH242-319A3,2:133966245-134062926
(Clone quality: bE319A3 on chr=2; Num_of_Contigs=3; )
TCERG1L   ENSSSCG00000010760 14:147024599-147031026   CU469013,CH242-329P14,14:147022986-147034766
(Clone quality: bE329P14 on chr=14; Num_of_Contigs=9; )
TCF1 ENSSSCG00000009919 14:41030504-41050007   CU467935,CH242-88C19,14:41029822-41073842
(Clone quality: bE88C19 on chr=14; Num_of_Contigs=7; )
TCF1 location ⇒ 14:41030504-41030977   CU467935,CH242-88C19,14:41029822-41073842
(Clone quality: bE88C19 on chr=14; Num_of_Contigs=7; )
TCF1 location ⇒ 14:41041934-41042181   CU467935,CH242-88C19,14:41029822-41073842
(Clone quality: bE88C19 on chr=14; Num_of_Contigs=7; )
TCF1 location ⇒ 14:41043840-41044043   CU467935,CH242-88C19,14:41029822-41073842
(Clone quality: bE88C19 on chr=14; Num_of_Contigs=7; )
TCF1 location ⇒ 14:41048755-41050007   CU467935,CH242-88C19,14:41029822-41073842
(Clone quality: bE88C19 on chr=14; Num_of_Contigs=7; )
TCF12 ENSSSCG00000004600 1:118870500-119383400    
TCF12 location ⇒ 1:118923668-118923522   CU856673,CH242-58J12,1:118904093-118930038
(Clone quality: bE58J12 on chr=1; Num_of_Contigs=12; )
TCF12 location ⇒ 1:118924082-118923941   CU856673,CH242-58J12,1:118904093-118930038
(Clone quality: bE58J12 on chr=1; Num_of_Contigs=12; )
TCF12 location ⇒ 1:118925202-118925111   CU856673,CH242-58J12,1:118904093-118930038
(Clone quality: bE58J12 on chr=1; Num_of_Contigs=12; )
TCF12 location ⇒ 1:119057103-119056966   CU466360,CH242-94D10,1:119053137-119058689
(Clone quality: bE94D10 on chr=1; Num_of_Contigs=3; )
TCF15   ENSSSCG00000007202 17:36433889-36439851   CU633926,CH242-284E11,17:36433482-36443098
(Clone quality: bE284E11 on chr=17; Num_of_Contigs=6; )
TCF19 ENSSSCG00000001392 7:27517029-27519824 CT737281,CH242-102G9,7:27394698-27581746
(Clone quality: bE102G9 on chr=7; Num_of_Contigs=3; ) 		 
TCF2 location ⇒ 14:41038795-41038958   CU467935,CH242-88C19,14:41029822-41073842
(Clone quality: bE88C19 on chr=14; Num_of_Contigs=7; )
TCF20   ENSSSCG00000000052 5:3206993-3212671   CU929647,CH242-429A18,5:3177004-3225418
(Clone quality: bE429A18 on chr=5; Num_of_Contigs=6; )
TCF21   ENSSSCG00000004174 1:31442142-31443258   CU466545,CH242-98L8,1:31441331-31454498
(Clone quality: bE98L8 on chr=1; Num_of_Contigs=11; )
TCF23   ENSSSCG00000008551 3:104416806-104419919   CU896571,CH242-143O19,3:104398046-104492436
(Clone quality: bE143O19 on chr=3; Num_of_Contigs=6; )
TCF25   ENSSSCG00000002636 6:42853-62221    
TCF3 ENSSSCG00000008241 3:54227917-54247923    
TCF3 ENSSSCG00000003262 6:40537272-40543900   FP102634,CH242-226O14,6:40531274-40550123
(Clone quality: bE226O14 on chr=6; Num_of_Contigs=5; )
TCF3 ENSSSCG00000013437 2:46600875-46636417   CU972485,CH242-416N2,2:46568566-46699601
(Clone quality: bE416N2 on chr=2; Num_of_Contigs=2; )
TCF3 location ⇒ 2:46601575-46601302   CU972485,CH242-416N2,2:46568566-46699601
(Clone quality: bE416N2 on chr=2; Num_of_Contigs=2; )
TCF3 location ⇒ 2:46601988-46601828   CU972485,CH242-416N2,2:46568566-46699601
(Clone quality: bE416N2 on chr=2; Num_of_Contigs=2; )
TCF3 location ⇒ 2:46604134-46603904   CU972485,CH242-416N2,2:46568566-46699601
(Clone quality: bE416N2 on chr=2; Num_of_Contigs=2; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-1000, 1001-1050, 1051-1100, 1101-1150, 1151-1200, 1201-1250, 1251-1300, 1301-1350, 1351-1400, 1401-1450, 1451-1500, 1501-1550, 1551-1600, 1601-1650, 1651-1700, 1701-1750, 1751-1800, 1801-1850, 1851-8

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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