A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Records 10601 - 10700:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
SH3GL1   ENSSSCG00000013508 2:48584668-48614909   CU972396,CH242-401E10,2:48541506-48658119
(Clone quality: bE401E10 on chr=2; Num_of_Contigs=4; )
SH3GL2   ENSSSCG00000005177 1:213976806-214178492    
SH3GL3   ENSSSCG00000001795 7:57419980-57555322    
SH3GLB1   ENSSSCG00000006930 4:134256175-134280292 CU695038,CH242-252F2,4:134247814-134289275
(Clone quality: bE252F2 on chr=13; Num_of_Contigs=4; ) 		 
SH3GLB2   ENSSSCG00000005668 1:283988486-284006610 CU076102,CH242-68C14,1:283855073-284074390
(Clone quality: bE68C14 on chr=1; Num_of_Contigs=6; ) 		 
SH3KBP1 ENSSSCG00000012160 X:15098687-15256316    
SH3PXD2A   ENSSSCG00000010604 14:119625068-119891611    
SH3PXD2B   ENSSSCG00000016993 16:49182275-49266006    
SH3RF1   ENSSSCG00000009716 14:20537396-20578855    
SH3RF2   ENSSSCG00000014410 2:133615751-133631427   CU928414,CH242-495G3,2:133557524-133651075
(Clone quality: bE495G3 on chr=2; Num_of_Contigs=5; )
SH3RF3   ENSSSCG00000008133 3:42388270-42491808   CU914503,CH242-223B15,3:42350228-42520767
(Clone quality: bE223B15 on chr=3; Num_of_Contigs=5; )
SH3TC1   ENSSSCG00000008722 8:3477163-3486608   FP003588,CH242-515K21,8:3475999-3487297
(Clone quality: bE515K21 on chr=8; Num_of_Contigs=11; )
SH3YL1   ENSSSCG00000008660 3:121540973-121557947   FP102370,CH242-323F11,3:121518511-121558380
(Clone quality: bE323F11 on chr=3; Num_of_Contigs=8; )
SHANK1   ENSSSCG00000003215 6:38985752-39116792    
SHANK2   ENSSSCG00000012864 2:1273564-1283402    
SHARPIN   ENSSSCG00000005914 4:587436-592087   FP085492,CH242-176F2,4:573710-645862
(Clone quality: bE176F2 on chr=4; Num_of_Contigs=15; )
SHAS2 ENSSSCG00000005992 4:17286752-17317131   CU302381,CH242-235I2,4:17213494-17395022
(Clone quality: bE235I2 on chr=4; Num_of_Contigs=1; )
SHB ENSSSCG00000005358 1:250081544-250196451    
SHC1 ENSSSCG00000006539 4:98928835-98935863   CU207227,CH242-365J2,4:98889060-98947503
(Clone quality: bE365J2 on chr=4; Num_of_Contigs=9; )
SHC3   ENSSSCG00000009581 14:768928-935245    
SHC4   ENSSSCG00000004655 1:128073308-128235567    
SHCBP1   ENSSSCG00000002849 6:25568892-25574749   CU929644,CH242-402M14,6:25566776-25575872
(Clone quality: bE402M14 on chr=6; Num_of_Contigs=6; )
SHD   ENSSSCG00000013503 2:48525453-48532030   CU929466,CH242-60A20,2:48517923-48541505
(Clone quality: bE60A20 on chr=2; Num_of_Contigs=5; )
SHE   ENSSSCG00000006547 4:99352058-99370836 CU469085,CH242-42I4,4:99200352-99380372
(Clone quality: bE42I4 on chr=4; Num_of_Contigs=1; ) 		 
SHF   ENSSSCG00000004674 1:132310125-132319923   CU062525,CH242-125K20,1:132198699-132329693
(Clone quality: bE125K20 on chr=1; Num_of_Contigs=2; )
SHH ENSSSCG00000016416 18:1734991-1744780    
SHISA4   ENSSSCG00000010917 10:24304955-24307729   CU896694,CH242-111D22,10:24267978-24372745
(Clone quality: bE111D22 on chr=10; Num_of_Contigs=6; )
SHISA5   ENSSSCG00000011357 13:26216688-26219490   CU633242,CH242-208G16,13:26215590-26232481
(Clone quality: bE208G16 on chr=13; Num_of_Contigs=5; )
SHISA6   ENSSSCG00000018012 12:53032326-53038565   CU466970,CH242-427E16,12:52938106-53155314
(Clone quality: bE427E16 on chr=12; Num_of_Contigs=1; )
SHISA7   ENSSSCG00000003290 6:41295937-41300992   FP245423,CH242-507H20,6:41294163-41314943
(Clone quality: bE507H20 on chr=6; Num_of_Contigs=16; )
SHMT2   ENSSSCG00000000421 5:21377332-21382933   CU633428,CH242-524E23,5:21373043-21392203
(Clone quality: bE524E23 on chr=5; Num_of_Contigs=9; )
SHOC2   ENSSSCG00000010628 14:126999861-127046472   CT737336,CH242-143P15,14:126897173-127111088
(Clone quality: bE143P15 on chr=14; Num_of_Contigs=1; )
SHOX   ENSSSCG00000012090 X:320841-330067 FP015869,CH242-24N12,X:269256-460080
(Clone quality: bE24N12 on chr=X; Num_of_Contigs=2; ) 		 
SHPK   ENSSSCG00000017864 12:47008486-47026452   FP016040,CH242-164K7,12:47005177-47045855
(Clone quality: bE164K7 on chr=12; Num_of_Contigs=2; )
SHPRH   ENSSSCG00000004120 1:20526290-20598245    
SHQ1   ENSSSCG00000011518 13:45868816-45929123    
SHROOM1   ENSSSCG00000014287 2:123059461-123062918 CU407038,CH242-18J12,2:123020435-123138962
(Clone quality: bE18J12 on chr=2; Num_of_Contigs=6; ) 		 
SHROOM2   ENSSSCG00000012104 X:5267496-5381946    
SHROOM3   ENSSSCG00000008984 8:61925599-61949828   FP015936,CH242-32L5,8:61911135-61952786
(Clone quality: bE32L5 on chr=8; Num_of_Contigs=3; )
SHROOM4   ENSSSCG00000012309 X:43619654-43727856    
SI   ENSSSCG00000011735 13:80439804-80458590    
SIAE   ENSSSCG00000015196 9:50340650-50378611    
SIAH1   ENSSSCG00000002840 6:24469965-24470813   FP236250,CH242-471I10,6:24468893-24472087
(Clone quality: bE471I10 on chr=6; Num_of_Contigs=13; )
SIAH3   ENSSSCG00000009416 11:20788686-20823004    
SIAT4A ENSSSCG00000005943 4:6695726-6705795   CU179695,CH242-327C11,4:6638178-6710539
(Clone quality: bE327C11 on chr=4; Num_of_Contigs=5; )
SIAT7B ENSSSCG00000017177 12:3277247-3285641   CU928356,CH242-33I18,12:3274501-3286837
(Clone quality: bE33I18 on chr=12; Num_of_Contigs=10; )
SIDT1   ENSSSCG00000011919 13:109259617-109268135   CU915398,CH242-257L23,13:109145832-109269113
(Clone quality: bE257L23 on chr=13; Num_of_Contigs=2; )
SIDT2   ENSSSCG00000015074 9:43299519-43314366   CU633260,CH242-267D22,9:43263576-43314400
(Clone quality: bE267D22 on chr=9; Num_of_Contigs=9; )
SIGLEC-2 ENSSSCG00000002894 6:30118885-30123429   CU694505,CH242-50N19,6:30118807-30135716
(Clone quality: bE50N19 on chr=6; Num_of_Contigs=14; )
SIGLEC-3 ENSSSCG00000003226 6:39295447-39301650   CU694842,CH242-204P3,6:39279332-39353368
(Clone quality: bE204P3 on chr=6; Num_of_Contigs=6; )
SIGLEC1 ENSSSCG00000007146 17:33507033-33526629    
SIGLEC14 ENSSSCG00000003236 6:39481730-39501436   CU019573,CH242-21M5,6:39444132-39502362
(Clone quality: bE21M5 on chr=6; Num_of_Contigs=9; )
SIGLEC15 ENSSSCG00000004493 1:99284559-99290281   CU694902,CH242-378G17,1:99170632-99336108
(Clone quality: bE378G17 on chr=1; Num_of_Contigs=1; )
SIGLEC2 ENSSSCG00000002894 6:30118885-30123429   CU694505,CH242-50N19,6:30118807-30135716
(Clone quality: bE50N19 on chr=6; Num_of_Contigs=14; )
SIGLEC5 ENSSSCG00000003236 6:39481730-39501436   CU019573,CH242-21M5,6:39444132-39502362
(Clone quality: bE21M5 on chr=6; Num_of_Contigs=9; )
SIK3   ENSSSCG00000015071 9:43020364-43127211    
SIKE1   ENSSSCG00000006751 4:110083894-110091056   CU151855,CH242-234C5,4:110062473-110097642
(Clone quality: bE234C5 on chr=4; Num_of_Contigs=10; )
SIL1   ENSSSCG00000014342 2:128004581-128183929    
SILV ENSSSCG00000000371 5:20308141-20314195    
SIM1   ENSSSCG00000004357 1:70627001-70709897    
SIN3A   ENSSSCG00000001880 7:63452446-63501381    
SIN3B   ENSSSCG00000013867 2:61364629-61404605    
SIP1   ENSSSCG00000004985 1:177600571-177625325    
SIPA1 ENSSSCG00000002332 7:103362224-103506697    
SIPA1 ENSSSCG00000010169 14:60001127-60116044    
SIPA1 ENSSSCG00000012982 2:5005234-5013225    
SIPA1L1   ENSSSCG00000002332 7:103362224-103506697    
SIPA1L2   ENSSSCG00000010169 14:60001127-60116044    
SIPA1L3   ENSSSCG00000002950 6:32313415-32345884    
SIRPA ENSSSCG00000007181 17:35100996-35142659   CU076083,CH242-165N9,17:35094633-35142680
(Clone quality: bE165N9 on chr=17; Num_of_Contigs=11; )
SIRPB2 ENSSSCG00000007185 17:35425579-35435570    
SIRPB2 ENSSSCG00000007185 17:35425579-35435570    
SIRPD ENSSSCG00000007182 17:35200771-35208882   CU407174,CH242-240D14,17:35171298-35216421
(Clone quality: bE240D14 on chr=17; Num_of_Contigs=11; )
SIRPD ENSSSCG00000007182 17:35200771-35208882   CU407174,CH242-240D14,17:35171298-35216421
(Clone quality: bE240D14 on chr=17; Num_of_Contigs=11; )
SIRT1   ENSSSCG00000010235 14:74220079-74245927   CT997807,CH242-507P18,14:74104999-74249590
(Clone quality: bE507P18 on chr=14; Num_of_Contigs=4; )
SIRT3   ENSSSCG00000014558 2:139842569-139858659   CU928488,CH242-163I11,2:139819049-139956868
(Clone quality: bE163I11 on chr=2; Num_of_Contigs=2; )
SIRT4   ENSSSCG00000009901 14:40430181-40439002    
SIRT5   ENSSSCG00000001055 7:9985118-10185983    
SIRT6   ENSSSCG00000013502 2:48514141-48515720   CU929466,CH242-60A20,2:48498879-48517822
(Clone quality: bE60A20 on chr=2; Num_of_Contigs=5; )
SIT1 ENSSSCG00000005312 1:247464276-247465700   CU062658,CH242-97C14,1:247426659-247546707
(Clone quality: bE97C14 on chr=1; Num_of_Contigs=2; )
SIX1 ENSSSCG00000005087 1:198366654-198369555   CU462967,CH242-442C15,1:198336966-198395017
(Clone quality: bE442C15 on chr=1; Num_of_Contigs=2; )
SIX2   ENSSSCG00000008446 3:88812052-88815064   FP067345,CH242-458A5,3:88804366-88815138
(Clone quality: bE458A5 on chr=3; Num_of_Contigs=6; )
SIX4 ENSSSCG00000005089 1:198419169-198427593   CU855869,CH242-339M6,1:198395018-198475768
(Clone quality: bE339M6 on chr=1; Num_of_Contigs=4; )
SIX6   ENSSSCG00000005086 1:198242930-198245057   CU462967,CH242-442C15,1:198238711-198336865
(Clone quality: bE442C15 on chr=1; Num_of_Contigs=2; )
SKAP1 ENSSSCG00000017527 12:21831008-21883082   FP016123,CH242-397L8,12:21776694-21937896
(Clone quality: bE397L8 on chr=12; Num_of_Contigs=6; )
SKAP2 ENSSSCG00000016708 18:44439045-44669864    
SKIL ENSSSCG00000011746 13:83042624-83098074    
SKIV2L ENSSSCG00000001424 7:27869040-27879647 CT956038,CH242-183N12,7:27767223-27953076
(Clone quality: bE183N12 on chr=7; Num_of_Contigs=3; ) 		 
SKIV2L2   ENSSSCG00000016911 16:32052023-32232504    
SKP2   ENSSSCG00000016835 16:18868174-18905906 CU856110,CH242-36H10,16:18824515-19007053
(Clone quality: bE36H10 on chr=16; Num_of_Contigs=2; ) 		 
SLA-1 ENSSSCG00000001229 7:24459993-24463671   FP085552,CH242-74M17,7:24423533-24504970
(Clone quality: bE74M17 on chr=7; Num_of_Contigs=9; )
SLA-1 ENSSSCG00000001231 7:24498283-24532919    
SLA-10 ENSSSCG00000001227 7:24377123-24396966    
SLA-10 ENSSSCG00000001229 7:24459993-24463671   FP085552,CH242-74M17,7:24423533-24504970
(Clone quality: bE74M17 on chr=7; Num_of_Contigs=9; )
SLA-11 ENSSSCG00000001341 7:26558428-26569310 CU498826,CH242-119D24,7:26553813-26728014
(Clone quality: bE119D24 on chr=7; Num_of_Contigs=31; ) 		 
SLA-2 ENSSSCG00000001227 7:24377123-24396966    
SLA-2 ENSSSCG00000001229 7:24459993-24463671   FP085552,CH242-74M17,7:24423533-24504970
(Clone quality: bE74M17 on chr=7; Num_of_Contigs=9; )
SLA-2 ENSSSCG00000001231 7:24498283-24532919    
SLA-3 ENSSSCG00000001227 7:24377123-24396966    
SLA2 ENSSSCG00000007321 17:42164310-42187808   CU607085,CH242-137E1,17:42127348-42190090
(Clone quality: bE137E1 on chr=17; Num_of_Contigs=8; )
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Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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