A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Records 11901 - 12000:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
STX10   ENSSSCG00000013752 2:56360272-56363181   CU914348,CH242-473F11,2:56357700-56393953
(Clone quality: bE473F11 on chr=2; Num_of_Contigs=7; )
STX11   ENSSSCG00000004125 1:22168666-22169529   CU234155,CH242-220C4,1:22148264-22178444
(Clone quality: bE220C4 on chr=1; Num_of_Contigs=7; )
STX16   ENSSSCG00000007516 17:61457168-61485451 CR956405,CH242-240K6,17:61451226-61584906
(No clone quality info on bE240K6) 		 
STX17   ENSSSCG00000005386 1:253319915-253408022    
STX1A   ENSSSCG00000007714 3:9296397-9304749   CU655977,CH242-166N19,3:9275764-9314897
(Clone quality: bE166N19 on chr=3; Num_of_Contigs=8; )
STX1B   ENSSSCG00000007772 3:16022181-16030446   CU914342,CH242-27O18,3:15998449-16034524
(Clone quality: bE27O18 on chr=3; Num_of_Contigs=6; )
STX2   ENSSSCG00000009747 14:24381184-24414065   CU468532,CH242-32J1,14:24369564-24416537
(Clone quality: bE32J1 on chr=14; Num_of_Contigs=7; )
STX3   ENSSSCG00000013119 2:9670666-9708511    
STX4   ENSSSCG00000007768 3:15927280-15936241    
STX6   ENSSSCG00000015539 9:114969533-115014884    
STX7   ENSSSCG00000004190 1:32676785-32728209 CU074298,CH242-141E21,1:32588124-32781733
(Clone quality: bE141E21 on chr=1; Num_of_Contigs=3; ) 		 
STXBP1   ENSSSCG00000005617 1:282527722-282566109    
STXBP2   ENSSSCG00000013576 2:51049836-51058692   CU929919,CH242-334A8,2:51013584-51060863
(Clone quality: bE334A8 on chr=2; Num_of_Contigs=7; )
STXBP3   ENSSSCG00000006843 4:115746582-115807283    
STXBP4   ENSSSCG00000017602 12:28806285-28910551    
STXBP5   ENSSSCG00000004113 1:19214945-19376816    
STXBP6   ENSSSCG00000001977 7:80545142-80867194    
STYK1   ENSSSCG00000000634 5:57940898-57955924   FP017141,CH242-24K3,5:57904188-58023971
(Clone quality: bE24K3 on chr=5; Num_of_Contigs=2; )
STYX   ENSSSCG00000005039 1:190824812-190871702   CU407115,CH242-342H5,1:190778660-191001332
(Clone quality: bE342H5 on chr=1; Num_of_Contigs=1; )
SUCLA2   ENSSSCG00000009405 11:19025551-19079863   CU927974,CH242-412J9,11:19025496-19170114
(Clone quality: bE412J9 on chr=11; Num_of_Contigs=1; )
SUCLG1   ENSSSCG00000008247 3:54911164-54946361    
SUCLG2   ENSSSCG00000011501 13:40717893-41010484    
SUDS3   ENSSSCG00000009849 14:34474307-34506988   CU468173,CH242-14F4,14:34457877-34508571
(Clone quality: bE14F4 on chr=14; Num_of_Contigs=7; )
SUFU   ENSSSCG00000010586 14:118526054-118648733    
SUGT1   ENSSSCG00000009441 11:24949127-24992795    
SULF1   ENSSSCG00000006197 4:67782294-67978721    
SULF2   ENSSSCG00000007456 17:51936789-52002572    
SULT4A1   ENSSSCG00000000026 5:1776610-1797297    
SUMF1   ENSSSCG00000011532 13:50902591-50992727   CU928100,CH242-264M15,13:50846452-50995620
(Clone quality: bE264M15 on chr=13; Num_of_Contigs=3; )
SUMO1 ENSSSCG00000003111 6:36696319-36765843   FP102474,CH242-104M2,6:36670130-36777370
(Clone quality: bE104M2 on chr=6; Num_of_Contigs=1; )
SUMO1 ENSSSCG00000008514 3:100775273-100775578   CU861984,CH242-378M9,3:100767915-100792335
(Clone quality: bE378M9 on chr=3; Num_of_Contigs=9; )
SUMO1 ENSSSCG00000011004 10:32463622-32473371   CU928691,CH242-242E10,10:32318250-32480524
(Clone quality: bE242E10 on chr=10; Num_of_Contigs=1; )
SUMO1 ENSSSCG00000011841 13:100446380-100498924    
SUMO2 ENSSSCG00000017212 12:4297804-4311546 CU928896,CH242-521B23,12:4294467-4388657
(Clone quality: bE521B23 on chr=12; Num_of_Contigs=4; ) 		 
SUMO4 ENSSSCG00000017212 12:4297804-4311546 CU928896,CH242-521B23,12:4294467-4388657
(Clone quality: bE521B23 on chr=12; Num_of_Contigs=4; ) 		 
SUOX   ENSSSCG00000000376 5:20400613-20404498    
SUPT3H   ENSSSCG00000001709 7:46635097-46963453    
SUPT4H1   ENSSSCG00000017639 12:32644393-32650734   CU571372,CH242-73D9,12:32562317-32656104
(Clone quality: bE73D9 on chr=12; Num_of_Contigs=4; )
SUPT7L   ENSSSCG00000008548 3:104211286-104216776    
SUPV3L1   ENSSSCG00000010251 14:75394156-75421289   CT737222,CH242-62M1,14:75343233-75510707
(Clone quality: bE62M1 on chr=14; Num_of_Contigs=1; )
SURF6   ENSSSCG00000003765 6:94125005-94125881   CU929925,CH242-365O3,6:94053648-94133388
(Clone quality: bE365O3 on chr=6; Num_of_Contigs=9; )
SUSD1   ENSSSCG00000005465 1:265672951-265793255    
SUV39H1   ENSSSCG00000011332 13:24969919-25027220    
SUV39H2   ENSSSCG00000011048 10:44576636-44583650   CU929591,CH242-21K12,10:44569457-44680253
(Clone quality: bE21K12 on chr=10; Num_of_Contigs=3; )
SUV420H1   ENSSSCG00000012887 2:3012437-3110208    
SUV420H2   ENSSSCG00000003297 6:41359933-41367567    
SV2A   ENSSSCG00000006666 4:103153961-103162503    
SV2B   ENSSSCG00000002262 7:94615234-94658202 CU367885,CH242-379L2,7:94585905-94792873
(Clone quality: bE379L2 on chr=7; Num_of_Contigs=1; ) 		 
SV2C   ENSSSCG00000014085 2:73864764-74074986    
SVEP1   ENSSSCG00000005455 1:264076650-264273604    
SVIL   ENSSSCG00000011022 10:39474660-39679035    
SVOP   ENSSSCG00000009941 14:42103688-42179583   CT954284,CH242-241M1,14:42019840-42206297
(Clone quality: bE241M1 on chr=14; Num_of_Contigs=1; )
SVOPL   ENSSSCG00000016517 18:9197184-9214880   FP236752,CH242-135G1,18:9190924-9218052
(Clone quality: bE135G1 on chr=18; Num_of_Contigs=4; )
SWAP70 ENSSSCG00000013410 2:45880572-45889735   CU928971,CH242-525M1,2:45833429-45891486
(Clone quality: bE525M1 on chr=2; Num_of_Contigs=5; )
SYAP1   ENSSSCG00000012148 X:12694894-12719654    
SYCE1   ENSSSCG00000010779 14:148105589-148108724    
SYCE1L   ENSSSCG00000002700 6:7786541-7792690   FP085416,CH242-260P4,6:7763653-7801275
(Clone quality: bE260P4 on chr=6; Num_of_Contigs=4; )
SYCE2   ENSSSCG00000013740 2:56113769-56115760   CU914382,CH242-275M24,2:56111569-56116284
(Clone quality: bE275M24 on chr=2; Num_of_Contigs=7; )
SYCN   ENSSSCG00000010710 14:138696776-138697183   FP236263,CH242-159G20,14:138694973-138703067
(Clone quality: bE159G20 on chr=14; Num_of_Contigs=8; )
SYCP1   ENSSSCG00000006750 4:109854947-109992603    
SYCP2   ENSSSCG00000007529 17:62493409-62573095    
SYDE1   ENSSSCG00000013829 2:60052027-60057996   CU915718,CH242-156C19,2:60006607-60065169
(Clone quality: bE156C19 on chr=2; Num_of_Contigs=6; )
SYDE2   ENSSSCG00000006947 4:135693944-135739124   CU595636,CH242-517I9,4:135693355-135754140
(Clone quality: bE517I9 on chr=4; Num_of_Contigs=3; )
SYK ENSSSCG00000008193 3:51825880-51842062    
SYK ENSSSCG00000009589 14:2618466-2676342   CU329688,CH242-307C4,14:2610978-2700701
(Clone quality: bE307C4 on chr=14; Num_of_Contigs=6; )
SYMPK ENSSSCG00000003093 6:36001320-36035868   FP102597,CH242-173N22,6:35989500-36043367
(Clone quality: bE173N22 on chr=6; Num_of_Contigs=4; )
SYN1   ENSSSCG00000012276 X:42058789-42110182    
SYN3   ENSSSCG00000000154 5:10230975-10680952    
SYNCRIP   ENSSSCG00000004294 1:57013611-57043212    
SYNE2 ENSSSCG00000005110 1:202841045-203109516    
SYNGAP1   ENSSSCG00000001513 7:34129201-34159851    
SYNGR1   ENSSSCG00000000088 5:5188767-5194577    
SYNGR3   ENSSSCG00000008036 3:36370434-36373210   FP102350,CH242-207G4,3:36359565-36381485
(Clone quality: bE207G4 on chr=3; Num_of_Contigs=8; )
SYNGR4   ENSSSCG00000003131 6:37420477-37422438   FP102301,CH242-20J11,6:37418263-37433567
(Clone quality: bE20J11 on chr=6; Note=In Finishing;)
SYNJ1   ENSSSCG00000012035 13:138639603-138712660    
SYNJ2   ENSSSCG00000012315 X:44294650-44362435    
SYNJ2BP   ENSSSCG00000002318 7:102299770-102319698   CU695063,CH242-376L7,7:102238342-102373323
(Clone quality: bE376L7 on chr=7; Num_of_Contigs=1; )
SYNPO2   ENSSSCG00000009111 8:90208385-90293945    
SYNPO2L   ENSSSCG00000010303 14:79699240-79706115   CT827821,CH242-151I16,14:79697766-79768615
(Clone quality: bE151I16 on chr=14; Num_of_Contigs=5; )
SYPL2   ENSSSCG00000006829 4:115165965-115178469   CU633714,CH242-413N19,4:115147581-115211057
(Clone quality: bE413N19 on chr=4; Num_of_Contigs=4; )
SYS1   ENSSSCG00000007395 17:49515190-49699686    
SYT1   ENSSSCG00000000948 5:96283973-96812569    
SYT10   ENSSSCG00000000527 5:40127198-40212502    
SYT11   ENSSSCG00000006506 4:98089212-98114716    
SYT13   ENSSSCG00000013275 2:15543734-15583456    
SYT14   ENSSSCG00000015610 9:125116490-125186468    
SYT16   ENSSSCG00000005098 1:200001436-200125722    
SYT17   ENSSSCG00000007870 3:23879326-23937708    
SYT2   ENSSSCG00000010926 10:24696448-24701607   CU694721,CH242-357H16,10:24692386-24702158
(Clone quality: bE357H16 on chr=10; Num_of_Contigs=13; )
SYT3   ENSSSCG00000003222 6:39136934-39150171    
SYT6   ENSSSCG00000006758 4:110770295-110827764   CU138563,CH242-230I15,4:110770286-110949832
(Clone quality: bE230I15 on chr=4; Num_of_Contigs=2; )
SYT7   ENSSSCG00000013089 2:8506444-8514868   CU896534,CH242-169N17,2:8505935-8517182
(Clone quality: bE169N17 on chr=2; Num_of_Contigs=6; )
SYT9   ENSSSCG00000014599 9:1613205-1700320    
SYTL1   ENSSSCG00000003572 6:58233785-58242719   CU466983,CH242-5M3,6:58217448-58296419
(Clone quality: bE5M3 on chr=6; Num_of_Contigs=5; )
SYTL3   ENSSSCG00000004057 1:9634442-9726008    
SYTL5   ENSSSCG00000012233 X:33386947-33491442    
T1 ENSSSCG00000000173 5:13278670-13312392   CU914692,CH242-143P14,5:13271941-13360701
(Clone quality: bE143P14 on chr=5; Num_of_Contigs=6; )
T1 ENSSSCG00000003451 6:50299906-50308519   FP236409,CH242-139N22,6:50299882-50316412
(Clone quality: bE139N22 on chr=6; Num_of_Contigs=12; )
T1 ENSSSCG00000003743 6:83007355-83137932    
T1 ENSSSCG00000004510 1:102229469-102256875    
Go to records:
1-100

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

© 2003-2025: USA · USDA · NRPSP8 · Program to Accelerate Animal Genomics Applications. Contact: Bioinformatics Team