A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Records 12701 - 12800:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
TPO ENSSSCG00000008654 3:121238336-121262947    
TPO ENSSSCG00000008656 3:121296853-121321119   FP102317,CH242-206A23,3:121296456-121349796
(Clone quality: bE206A23 on chr=3; Num_of_Contigs=8; )
TPP2 ENSSSCG00000009528 11:71772523-71833522    
TPPP3   ENSSSCG00000002780 6:13165414-13169075   CU929737,CH242-250E5,6:13062455-13202086
(Clone quality: bE250E5 on chr=6; Num_of_Contigs=3; )
TPR   ENSSSCG00000015576 9:119856532-119884150   CU657929,CH242-301H1,9:119854087-120036038
(Clone quality: bE301H1 on chr=9; Num_of_Contigs=1; )
TPRG1   ENSSSCG00000011812 13:95666070-95770781   CU896615,CH242-183I14,13:95588779-95777625
(Clone quality: bE183I14 on chr=13; Num_of_Contigs=1; )
TPRG1L   ENSSSCG00000003359 6:43680047-43683396   FP102698,CH242-39I24,6:43627875-43737015
(Clone quality: bE39I24 on chr=6; Num_of_Contigs=5; )
TPRKB   ENSSSCG00000008297 3:63643304-63650784   CU463123,CH242-385I3,3:63635986-63650897
(Clone quality: bE385I3 on chr=3; Num_of_Contigs=11; )
TPST1 ENSSSCG00000007737 3:14951759-14952604   FP102616,CH242-199K9,3:14941396-14974633
(Clone quality: bE199K9 on chr=3; Num_of_Contigs=7; )
TPST2   ENSSSCG00000009963 14:44863953-44882431 CT737259,CH242-127E12,14:44858989-45080062
(Clone quality: bE127E12 on chr=14; Num_of_Contigs=2; ) 		 
TPT1 ENSSSCG00000000622 5:57210433-57210965   CU459114,CH242-375L4,5:57201915-57248947
(Clone quality: bE375L4 on chr=5; Num_of_Contigs=4; )
TPT1 ENSSSCG00000000622 5:57210433-57210965   CU459114,CH242-375L4,5:57201915-57248947
(Clone quality: bE375L4 on chr=5; Num_of_Contigs=4; )
TPX2   ENSSSCG00000007235 17:37571040-37594704    
TRA1 ENSSSCG00000000849 5:75619944-75627941   CU457468,CH242-236A7,5:75618918-75633153
(Clone quality: bE236A7 on chr=5; Num_of_Contigs=7; )
TRA1 ENSSSCG00000011690 13:70668942-70698710   CU855852,CH242-90H6,13:70661837-70722848
(Clone quality: bE90H6 on chr=13; Num_of_Contigs=3; )
TRA2A   ENSSSCG00000015387 9:86198792-86211167    
TRABD   ENSSSCG00000000974 5:99860745-99868909    
TRAC ENSSSCG00000003729 6:80171719-80214020   CU019565,CH242-10N23,6:80107005-80257433
(Clone quality: bE10N23 on chr=6; Num_of_Contigs=3; )
TRAF1 ENSSSCG00000005511 1:274524224-274541563   CU571013,CH242-185E21,1:274522615-274555390
(Clone quality: bE185E21 on chr=1; Num_of_Contigs=9; )
TRAF2 ENSSSCG00000005838 1:294218229-294223476    
TRAF2 ENSSSCG00000009129 8:94802669-94803223   CU928659,CH242-251I11,8:94798741-94825226
(Clone quality: bE251I11 on chr=8; Num_of_Contigs=13; )
TRAF2 ENSSSCG00000015889 15:63234458-63286480    
TRAF3 ENSSSCG00000002525 7:130944988-130993025   CT998550,CH242-445C19,7:130928637-130997560
(Clone quality: bE445C19 on chr=7; Num_of_Contigs=6; )
TRAF3 ENSSSCG00000004420 1:81057780-81094457    
TRAF3 ENSSSCG00000015615 9:125559220-125650912    
TRAF3 ENSSSCG00000016341 15:130595565-130605939   CU571360,CH242-35A9,15:130590527-130608096
(Clone quality: bE35A9 on chr=15; Num_of_Contigs=19; )
TRAF3IP1 ENSSSCG00000016341 15:130595565-130605939   CU571360,CH242-35A9,15:130590527-130608096
(Clone quality: bE35A9 on chr=15; Num_of_Contigs=19; )
TRAF3IP2 ENSSSCG00000004420 1:81057780-81094457    
TRAF3IP3   ENSSSCG00000015615 9:125559220-125650912    
TRAF4 ENSSSCG00000001961 7:71000026-71042602   CT867954,CH242-216K6,7:70958499-71046494
(Clone quality: bE216K6 on chr=7; Num_of_Contigs=4; )
TRAF4 ENSSSCG00000004775 1:137383759-137396279   CU234165,CH242-252B18,1:137339871-137454558
(Clone quality: bE252B18 on chr=1; Num_of_Contigs=2; )
TRAF4 ENSSSCG00000017775 12:42745640-42747990   FP016171,CH242-62B5,12:42743508-42749566
(Clone quality: bE62B5 on chr=12; Num_of_Contigs=5; )
TRAF5 ENSSSCG00000015606 9:124194435-124202127    
TRAF6 ENSSSCG00000013291 2:23181693-23201454    
TRAF6 ENSSSCG00000016692 18:43317028-43348158    
TRAF7   ENSSSCG00000008043 3:36522833-36539465   FP102350,CH242-207G4,3:36503076-36556623
(Clone quality: bE207G4 on chr=3; Num_of_Contigs=8; )
TRAFD1 ENSSSCG00000009886 14:39534268-39550318   CU582807,CH242-322D6,14:39531876-39551019
(Clone quality: bE322D6 on chr=14; Num_of_Contigs=11; )
TRAIN A ENSSSCG00000002134 7:84828922-84831499   CT955972,CH242-231D20,7:84744010-84860439
(Clone quality: bE231D20 on chr=7; Num_of_Contigs=1; )
TRAK1   ENSSSCG00000011276 13:21620351-21624805   CU928734,CH242-406G23,13:21620082-21631089
(Clone quality: bE406G23 on chr=13; Num_of_Contigs=4; )
TRAK2   ENSSSCG00000016104 15:98672201-98701320   CU928282,CH242-38C15,15:98671239-98735021
(Clone quality: bE38C15 on chr=15; Num_of_Contigs=9; )
TRAM1 ENSSSCG00000006193 4:66905754-66936848    
TRAM2   ENSSSCG00000002621 7:135457028-135536668    
TRAP ENSSSCG00000001022 7:4633365-4654265   CU469365,CH242-149A19,7:4528264-4656133
(Clone quality: bE149A19 on chr=7; Num_of_Contigs=3; )
TRAP ENSSSCG00000005364 1:250807805-250875573   CU407125,CH242-372M9,1:250708340-250913158
(Clone quality: bE372M9 on chr=1; Num_of_Contigs=1; )
TRAP ENSSSCG00000006501 4:97957239-97968450   CU151868,CH242-286M6,4:97945564-98074701
(Clone quality: bE286M6 on chr=4; Num_of_Contigs=4; )
TRAP ENSSSCG00000009404 11:18973025-18980781   FP085602,CH242-266M16,11:18971338-18989709
(Clone quality: bE266M16 on chr=11; Num_of_Contigs=8; )
TRAP1 ENSSSCG00000007952 3:34573763-34602224    
TRAPPC2   ENSSSCG00000012124 X:9467114-9478991 CU633939,CH242-187N24,X:9427527-9513452
(Clone quality: bE187N24 on chr=X; Num_of_Contigs=4; ) 		 
TRAPPC2L   ENSSSCG00000002646 6:380948-384224    
TRAPPC3   ENSSSCG00000003638 6:62696509-62707095   CU929602,CH242-252C17,6:62679016-62720758
(Clone quality: bE252C17 on chr=6; Num_of_Contigs=6; )
TRAPPC4 ENSSSCG00000015104 9:44832756-44836873   CU695209,CH242-241K21,9:44763573-44853404
(Clone quality: bE241K21 on chr=9; Num_of_Contigs=5; )
TRAPPC4 ENSSSCG00000015104 9:44832756-44836873   CU695209,CH242-241K21,9:44763573-44853404
(Clone quality: bE241K21 on chr=9; Num_of_Contigs=5; )
TRAPPC5   ENSSSCG00000013573 2:51015720-51016286   CU929919,CH242-334A8,2:51013584-51060863
(Clone quality: bE334A8 on chr=2; Num_of_Contigs=7; )
TRAPPC6B   ENSSSCG00000004986 1:177636397-177729090    
TRAPPC9   ENSSSCG00000005934 4:1712609-2190793    
TRAT1 ENSSSCG00000011938 13:112034441-112056638   CU633542,CH242-152C22,13:112028631-112094318
(Clone quality: bE152C22 on chr=13; Num_of_Contigs=5; )
TRB@ ENSSSCG00000007208 17:36716172-36752493    
TRB@ ENSSSCG00000008623 3:115035691-115056815    
TRBV19 ENSSSCG00000016475 18:6251209-6534313    
TRBV19 ENSSSCG00000016479 18:6358640-6359348   CU655925,CH242-295C16,18:6357691-6386430
(Clone quality: bE295C16 on chr=18; Num_of_Contigs=15; )
TRBV30   ENSSSCG00000016474 18:6227996-6228667   CU928245,CH242-100K20,18:6180123-6237420
(Clone quality: bE100K20 on chr=18; Num_of_Contigs=3; )
TRDMT1   ENSSSCG00000011032 10:41732466-41740551   CU915356,CH242-407C23,10:41723355-41741281
(Clone quality: bE407C23 on chr=10; Num_of_Contigs=14; )
TRDN   ENSSSCG00000004231 1:41045898-41050920   CU694551,CH242-15A22,1:41009316-41128317
(Clone quality: bE15A22 on chr=1; Num_of_Contigs=2; )
TREM1 ENSSSCG00000001617 7:41979653-42001160   CU306815,CH242-32N5,7:41973045-42041868
(Clone quality: bE32N5 on chr=7; Num_of_Contigs=10; )
TREM2 ENSSSCG00000001614 7:41921070-41926634   CU550655,CH242-156C23,7:41899634-41926917
(Clone quality: bE156C23 on chr=7; Num_of_Contigs=10; )
TREML1 ENSSSCG00000001613 7:41910767-41915858   CU550655,CH242-156C23,7:41899634-41926917
(Clone quality: bE156C23 on chr=7; Num_of_Contigs=10; )
TREML2 ENSSSCG00000001616 7:41953035-41963145   CU550655,CH242-156C23,7:41946780-41963367
(Clone quality: bE156C23 on chr=7; Num_of_Contigs=10; )
TRG@ ENSSSCG00000008225 3:53542683-53578492   CU570839,CH242-286N20,3:53540211-53717808
(Clone quality: bE286N20 on chr=3; Num_of_Contigs=1; )
TRG@ ENSSSCG00000016985 16:48475943-48486629   CU928102,CH242-282H22,16:48385360-48486838
(Clone quality: bE282H22 on chr=16; Num_of_Contigs=5; )
TRG@ ENSSSCG00000017106 16:72900438-72908115   CU915407,CH242-304C24,16:72868010-72973211
(Clone quality: bE304C24 on chr=16; Num_of_Contigs=2; )
TRH ENSSSCG00000000515 5:35506391-35909930    
TRH ENSSSCG00000011596 13:57837217-57838594   CU856531,CH242-250G6,13:57835750-57838789
(Clone quality: bE250G6 on chr=13; Num_of_Contigs=16; )
TRHDE   ENSSSCG00000000515 5:35506391-35909930    
TRHR   ENSSSCG00000006030 4:28416262-28417059   CU695049,CH242-278E21,4:28412895-28513626
(Clone quality: bE278E21 on chr=4; Num_of_Contigs=2; )
TRIAD3 ENSSSCG00000007587 3:3952543-3969567   FP102569,CH242-151E19,3:3887357-3971939
(Clone quality: bE151E19 on chr=3; Num_of_Contigs=3; )
TRIAP1   ENSSSCG00000009908 14:40550770-40552174    
TRIB2   ENSSSCG00000008623 3:115035691-115056815    
TRIB3 ENSSSCG00000007208 17:36716172-36752493    
TRIM10 ENSSSCG00000001234 7:24602463-24638703 CU311184,CH242-196B23,7:24509864-24676459
(Clone quality: bE196B23 on chr=7; Num_of_Contigs=3; ) 		 
TRIM11 ENSSSCG00000014000 2:67002982-67020167 FP015983,CH242-74L12,2:66907442-67096474
(Clone quality: bE74L12 on chr=2; Num_of_Contigs=3; ) 		 
TRIM13   ENSSSCG00000009389 11:17641278-17642501   CU062573,CH242-415L14,11:17628495-17647998
(Clone quality: bE415L14 on chr=11; Num_of_Contigs=7; )
TRIM14 ENSSSCG00000005374 1:251468742-251495122    
TRIM15 ENSSSCG00000001235 7:24614675-24625850 CU311184,CH242-196B23,7:24509864-24676459
(Clone quality: bE196B23 on chr=7; Num_of_Contigs=3; ) 		 
TRIM2   ENSSSCG00000009008 8:64811415-64992439    
TRIM21   ENSSSCG00000014780 9:5122888-5130672   CU915729,CH242-257A21,9:5115921-5135602
(Clone quality: bE257A21 on chr=9; Num_of_Contigs=10; )
TRIM23   ENSSSCG00000016948 16:41475694-41516472   CU856268,CH242-30E20,16:41457783-41623625
(Clone quality: bE30E20 on chr=16; Num_of_Contigs=2; )
TRIM24   ENSSSCG00000016518 18:9219702-9226597   FP236752,CH242-135G1,18:9218153-9282301
(Clone quality: bE135G1 on chr=18; Num_of_Contigs=4; )
TRIM25 ENSSSCG00000017614 12:31001929-31007597    
TRIM26 ENSSSCG00000001233 7:24577160-24599603 CU311184,CH242-196B23,7:24509864-24676459
(Clone quality: bE196B23 on chr=7; Num_of_Contigs=3; ) 		 
TRIM27   ENSSSCG00000001219 7:24193693-24211158 FP085562,CH242-160O9,7:24118819-24263585
(Clone quality: bE160O9 on chr=7; Num_of_Contigs=12; ) 		 
TRIM29   ENSSSCG00000015126 9:45975250-46001459    
TRIM3   ENSSSCG00000014625 9:2575350-2590957    
TRIM31 ENSSSCG00000001243 7:24788009-24800654 CT737425,CH242-47O8,7:24783186-24956885
(Clone quality: bE47O8 on chr=7; Num_of_Contigs=3; ) 		 
TRIM32 ENSSSCG00000005501 1:270344213-270346174   CU633594,CH242-470G22,1:270332056-270363194
(Clone quality: bE470G22 on chr=1; Num_of_Contigs=6; )
TRIM33   ENSSSCG00000006757 4:110415642-110546010    
TRIM35   ENSSSCG00000009663 14:11151446-11169577   CT990535,CH242-108M15,14:11101852-11251924
(Clone quality: bE108M15 on chr=14; Num_of_Contigs=1; )
TRIM36   ENSSSCG00000014214 2:107965113-108008712   CU693413,CH242-277B14,2:107894653-108062188
(Clone quality: bE277B14 on chr=2; Num_of_Contigs=2; )
TRIM37   ENSSSCG00000017648 12:33297451-33431089    
TRIM38 ENSSSCG00000001110 7:21870677-21882440   CT797471,CH242-54M14,7:21795511-21989531
(Clone quality: bE54M14 on chr=7; Num_of_Contigs=1; )
TRIM39 ENSSSCG00000001342 7:26601660-26615656 CU498826,CH242-119D24,7:26553813-26728014
(Clone quality: bE119D24 on chr=7; Num_of_Contigs=31; ) 		 
Go to records:
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Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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