A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Records 15001 - 15100:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
CACNA1S location ⇒ 5:65107347-65107403   CU467896,CH242-34G22,5:65102199-65110639
(Clone quality: bE34G22 on chr=5; Num_of_Contigs=20; )
CACNA1S location ⇒ 5:65114903-65114969   CU467896,CH242-34G22,5:65110740-65141248
(Clone quality: bE34G22 on chr=5; Num_of_Contigs=20; )
CACNA1S location ⇒ 5:65152528-65152473   CU467896,CH242-34G22,5:65141349-65164940
(Clone quality: bE34G22 on chr=5; Num_of_Contigs=20; )
CACNA1S location ⇒ 5:65209738-65209677   CU467896,CH242-34G22,5:65200988-65210509
(Clone quality: bE34G22 on chr=5; Num_of_Contigs=20; )
CACNB4 location ⇒ 8:36690707-36690862   FP016030,CH242-203L13,8:36675472-36701432
(Clone quality: bE203L13 on chr=8; Num_of_Contigs=3; )
CALCA location ⇒ 2:41167838-41168026   CU928260,CH242-273B21,2:41162604-41257476
(Clone quality: bE273B21 on chr=2; Num_of_Contigs=3; )
CALCA location ⇒ 2:41288517-41288599   CU928260,CH242-273B21,2:41257577-41300655
(Clone quality: bE273B21 on chr=2; Num_of_Contigs=3; )
CALCA location ⇒ 2:41370725-41370807   CU606994,CH242-513N24,2:41325835-41371753
(Clone quality: bE513N24 on chr=2; Num_of_Contigs=5; )
CALCA location ⇒ 2:41384463-41384532   CU606994,CH242-513N24,2:41371854-41392335
(Clone quality: bE513N24 on chr=2; Num_of_Contigs=5; )
CALM2 location ⇒ 13:108912990-108911869   FP236287,CH242-278E9,13:108897828-108915422
(Clone quality: bE278E9 on chr=13; Num_of_Contigs=9; )
CALR location ⇒ 2:56286457-56286663   CU463133,CH242-121E19,2:56264935-56304744
(Clone quality: bE121E19 on chr=2; Num_of_Contigs=6; )
CALR location ⇒ 2:56287272-56287484   CU463133,CH242-121E19,2:56264935-56304744
(Clone quality: bE121E19 on chr=2; Num_of_Contigs=6; )
CALR location ⇒ 2:56287565-56287681   CU463133,CH242-121E19,2:56264935-56304744
(Clone quality: bE121E19 on chr=2; Num_of_Contigs=6; )
CALR location ⇒ 2:56287762-56287891   CU463133,CH242-121E19,2:56264935-56304744
(Clone quality: bE121E19 on chr=2; Num_of_Contigs=6; )
CALR3 location ⇒ 2:61039553-61039456   CU694762,CH242-123E16,2:61018016-61070712
(Clone quality: bE123E16 on chr=2; Num_of_Contigs=2; )
CALR3 location ⇒ 2:61052879-61052671   CU694762,CH242-123E16,2:61018016-61070712
(Clone quality: bE123E16 on chr=2; Num_of_Contigs=2; )
CALR3 location ⇒ 2:61057415-61057310   CU694762,CH242-123E16,2:61018016-61070712
(Clone quality: bE123E16 on chr=2; Num_of_Contigs=2; )
CALR3 location ⇒ 2:61057769-61057619   CU694762,CH242-123E16,2:61018016-61070712
(Clone quality: bE123E16 on chr=2; Num_of_Contigs=2; )
CAMK2A location ⇒ 2:136625859-136625981   CU914366,CH242-274B11,2:136604505-136635615
(Clone quality: bE274B11 on chr=2; Num_of_Contigs=10; )
CAMK2A location ⇒ 2:136645774-136645868   CU914366,CH242-274B11,2:136635716-136663326
(Clone quality: bE274B11 on chr=2; Num_of_Contigs=10; )
CAMK2A location ⇒ 2:136649410-136649579   CU914366,CH242-274B11,2:136635716-136663326
(Clone quality: bE274B11 on chr=2; Num_of_Contigs=10; )
CAMK2A location ⇒ 2:136762875-136762997   FP102406,CH242-294F6,2:136762372-136765009
(Clone quality: bE294F6 on chr=2; Num_of_Contigs=13; )
CAMK2G location ⇒ 14:79839459-79839250   CU640439,CH242-168L21,14:79822021-79894539
(Clone quality: bE168L21 on chr=14; Num_of_Contigs=4; )
CAMK2G location ⇒ 14:79839459-79839250   CU640439,CH242-168L21,14:79822021-79894539
(Clone quality: bE168L21 on chr=14; Num_of_Contigs=4; )
CAMK2G location ⇒ 14:79840294-79840049   CU640439,CH242-168L21,14:79822021-79894539
(Clone quality: bE168L21 on chr=14; Num_of_Contigs=4; )
CAMK2G location ⇒ 14:79840294-79840049   CU640439,CH242-168L21,14:79822021-79894539
(Clone quality: bE168L21 on chr=14; Num_of_Contigs=4; )
CAMLG location ⇒ 2:124715845-124716050   CU862042,CH242-222J18,2:124705772-124719510
(Clone quality: bE222J18 on chr=2; Num_of_Contigs=7; )
CAMLG location ⇒ 2:124717720-124718181   CU862042,CH242-222J18,2:124705772-124719510
(Clone quality: bE222J18 on chr=2; Num_of_Contigs=7; )
CAMP location ⇒ 13:26044977-26044870   FP102065,CH242-145E9,13:26011061-26058464
(Clone quality: bE145E9 on chr=13; Num_of_Contigs=12; )
CAMP location ⇒ 13:26045596-26045381   FP102065,CH242-145E9,13:26011061-26058464
(Clone quality: bE145E9 on chr=13; Num_of_Contigs=12; )
CANT1 location ⇒ 3:38377017-38376728   FP102259,CH242-507E20,3:38318964-38457094
(Clone quality: bE507E20 on chr=3; Num_of_Contigs=3; )
CANX location ⇒ 2:68225190-68223288   FP015930,CH242-222N20,2:68151095-68227732
(Clone quality: bE222N20 on chr=2; Num_of_Contigs=11; )
CANX location ⇒ 2:68231776-68231559   FP015930,CH242-222N20,2:68227833-68248246
(Clone quality: bE222N20 on chr=2; Num_of_Contigs=11; )
CANX location ⇒ 2:68236244-68236054   FP015930,CH242-222N20,2:68227833-68248246
(Clone quality: bE222N20 on chr=2; Num_of_Contigs=11; )
CANX location ⇒ 2:68237241-68237048   FP015930,CH242-222N20,2:68227833-68248246
(Clone quality: bE222N20 on chr=2; Num_of_Contigs=11; )
CAP1 location ⇒ 6:66065056-66064760 CR974432,PigE-204L22,6:65914672-66073853
(No clone quality info on bT204L22)
 
CAP1 location ⇒ 6:66065939-66065138 CR974432,PigE-204L22,6:65914672-66073853
(No clone quality info on bT204L22)
 
CAP1 location ⇒ 6:66067973-66067787 CR974432,PigE-204L22,6:65914672-66073853
(No clone quality info on bT204L22)
 
CAP1 location ⇒ 6:66070236-66070180 CR974432,PigE-204L22,6:65914672-66073853
(No clone quality info on bT204L22)
 
CAPN1 location ⇒ 2:5398749-5398013 CU457406,CH242-284K16,2:5352106-5575890
(Clone quality: bE284K16 on chr=2; Num_of_Contigs=20; )
 
CAPN1 location ⇒ 2:5400222-5399444 CU457406,CH242-284K16,2:5352106-5575890
(Clone quality: bE284K16 on chr=2; Num_of_Contigs=20; )
 
CAPN1 location ⇒ 2:5403236-5403026 CU457406,CH242-284K16,2:5352106-5575890
(Clone quality: bE284K16 on chr=2; Num_of_Contigs=20; )
 
CAPN1 location ⇒ 2:5422981-5422705 CU457406,CH242-284K16,2:5352106-5575890
(Clone quality: bE284K16 on chr=2; Num_of_Contigs=20; )
 
CAPN3 location ⇒ 1:135199837-135199626   CU694786,CH242-266K24,1:135189684-135203771
(Clone quality: bE266K24 on chr=1; Num_of_Contigs=5; )
CAPN3 location ⇒ 1:135201278-135201104   CU694786,CH242-266K24,1:135189684-135203771
(Clone quality: bE266K24 on chr=1; Num_of_Contigs=5; )
CAPN3 location ⇒ 1:135233459-135233290   CU463161,CH242-286I1,1:135227749-135313166
(Clone quality: bE286I1 on chr=1; Num_of_Contigs=2; )
CAPN3 location ⇒ 1:135267797-135267447   CU463161,CH242-286I1,1:135227749-135313166
(Clone quality: bE286I1 on chr=1; Num_of_Contigs=2; )
CAPNS1 location ⇒ 16:69409140-69408457   CU915698,CH242-91L11,16:69407506-69415986
(Clone quality: bE91L11 on chr=16; Num_of_Contigs=4; )
CAR location ⇒ 4:92735018-92735201   CU606874,CH242-28G15,4:92698180-92745360
(Clone quality: bE28G15 on chr=4; Num_of_Contigs=6; )
CAR location ⇒ 4:92735353-92735496   CU606874,CH242-28G15,4:92698180-92745360
(Clone quality: bE28G15 on chr=4; Num_of_Contigs=6; )
CAR location ⇒ 4:92737537-92737706   CU606874,CH242-28G15,4:92698180-92745360
(Clone quality: bE28G15 on chr=4; Num_of_Contigs=6; )
CAR location ⇒ 4:92739804-92740063   CU606874,CH242-28G15,4:92698180-92745360
(Clone quality: bE28G15 on chr=4; Num_of_Contigs=6; )
CARD12 location ⇒ 3:101142314-101141890   CU469148,CH242-287E22,3:101138210-101144928
(Clone quality: bE287E22 on chr=3; Num_of_Contigs=23; )
CARD14 location ⇒ 12:1266095-1265969   CU655945,CH242-412P7,12:1253941-1266123
(Clone quality: bE412P7 on chr=12; Num_of_Contigs=12; )
CARD14 location ⇒ 12:1267092-1266953   CU655945,CH242-412P7,12:1266224-1276795
(Clone quality: bE412P7 on chr=12; Num_of_Contigs=12; )
CARD14 location ⇒ 12:1268430-1268201   CU655945,CH242-412P7,12:1266224-1276795
(Clone quality: bE412P7 on chr=12; Num_of_Contigs=12; )
CARD14 location ⇒ 12:1270313-1270260   CU655945,CH242-412P7,12:1266224-1276795
(Clone quality: bE412P7 on chr=12; Num_of_Contigs=12; )
CARD4 location ⇒ 18:40823129-40823572   CU655860,CH242-247K17,18:40794666-40836370
(Clone quality: bE247K17 on chr=18; Num_of_Contigs=10; )
CARD4 location ⇒ 18:40826871-40826957   CU655860,CH242-247K17,18:40794666-40836370
(Clone quality: bE247K17 on chr=18; Num_of_Contigs=10; )
CARD4 location ⇒ 18:40828716-40828800   CU655860,CH242-247K17,18:40794666-40836370
(Clone quality: bE247K17 on chr=18; Num_of_Contigs=10; )
CARD4 location ⇒ 18:40830191-40830274   CU655860,CH242-247K17,18:40794666-40836370
(Clone quality: bE247K17 on chr=18; Num_of_Contigs=10; )
CARHSP1 location ⇒ 3:29961962-29962032   FP089531,CH242-200J6,3:29932646-29993310
(Clone quality: bE200J6 on chr=3; Num_of_Contigs=7; )
CARHSP1 location ⇒ 3:29962956-29963078   FP089531,CH242-200J6,3:29932646-29993310
(Clone quality: bE200J6 on chr=3; Num_of_Contigs=7; )
CARHSP1 location ⇒ 3:29964984-29965150   FP089531,CH242-200J6,3:29932646-29993310
(Clone quality: bE200J6 on chr=3; Num_of_Contigs=7; )
CASK location ⇒ X:36800155-36800465   CU856415,CH242-203M4,X:36790012-36812631
(Clone quality: bE203M4 on chr=X; Num_of_Contigs=7; )
CASK location ⇒ X:36804395-36804481   CU856415,CH242-203M4,X:36790012-36812631
(Clone quality: bE203M4 on chr=X; Num_of_Contigs=7; )
CASK location ⇒ X:36811797-36812000   CU856415,CH242-203M4,X:36790012-36812631
(Clone quality: bE203M4 on chr=X; Num_of_Contigs=7; )
CASK location ⇒ X:36813882-36813966   CU856415,CH242-203M4,X:36812732-36890208
(Clone quality: bE203M4 on chr=X; Num_of_Contigs=7; )
CASP1 location ⇒ 9:34950356-34950206   CU855956,CH242-116E23,9:34933346-35042600
(Clone quality: bE116E23 on chr=9; Num_of_Contigs=6; )
CASP1 location ⇒ 9:34951008-34950773   CU855956,CH242-116E23,9:34933346-35042600
(Clone quality: bE116E23 on chr=9; Num_of_Contigs=6; )
CASP1 location ⇒ 9:34951588-34951412   CU855956,CH242-116E23,9:34933346-35042600
(Clone quality: bE116E23 on chr=9; Num_of_Contigs=6; )
CASP1 location ⇒ 9:34958330-34958070   CU855956,CH242-116E23,9:34933346-35042600
(Clone quality: bE116E23 on chr=9; Num_of_Contigs=6; )
CASP12 location ⇒ 9:34919975-34919800   CU855956,CH242-116E23,9:34904888-34921749
(Clone quality: bE116E23 on chr=9; Num_of_Contigs=6; )
CASP12 location ⇒ 9:34920463-34920381   CU855956,CH242-116E23,9:34904888-34921749
(Clone quality: bE116E23 on chr=9; Num_of_Contigs=6; )
CASP12 location ⇒ 9:34924157-34924030   CU855956,CH242-116E23,9:34921850-34933245
(Clone quality: bE116E23 on chr=9; Num_of_Contigs=6; )
CASP12 location ⇒ 9:34929344-34929239   CU855956,CH242-116E23,9:34921850-34933245
(Clone quality: bE116E23 on chr=9; Num_of_Contigs=6; )
CASP14 location ⇒ 2:60191072-60191221   CU915718,CH242-156C19,2:60173510-60199107
(Clone quality: bE156C19 on chr=2; Num_of_Contigs=6; )
CASP2 location ⇒ 18:5851047-5850852   CU929961,CH242-59I9,18:5825279-5863758
(Clone quality: bE59I9 on chr=18; Num_of_Contigs=6; )
CASP2 location ⇒ 18:5854498-5854336   CU929961,CH242-59I9,18:5825279-5863758
(Clone quality: bE59I9 on chr=18; Num_of_Contigs=6; )
CASP2 location ⇒ 18:5960564-5960369   CU928380,CH242-107B19,18:5868328-5998133
(Clone quality: bE107B19 on chr=18; Num_of_Contigs=4; )
CASP2 location ⇒ 18:5964015-5963853   CU928380,CH242-107B19,18:5868328-5998133
(Clone quality: bE107B19 on chr=18; Num_of_Contigs=4; )
CASP3 location ⇒ 15:22215-22304   FP236224,CH242-441A13,15:15069-25523
(Clone quality: bE441A13 on chr=15; Num_of_Contigs=3; )
CASP3 location ⇒ 15:32526-32421   FP236224,CH242-441A13,15:25624-50693
(Clone quality: bE441A13 on chr=15; Num_of_Contigs=3; )
CASP3 location ⇒ 15:43099-43204   FP236224,CH242-441A13,15:25624-50693
(Clone quality: bE441A13 on chr=15; Num_of_Contigs=3; )
CASP3 location ⇒ 15:46839-46687   FP236224,CH242-441A13,15:25624-50693
(Clone quality: bE441A13 on chr=15; Num_of_Contigs=3; )
CASP4 location ⇒ 9:34918584-34918525   CU855956,CH242-116E23,9:34904888-34921749
(Clone quality: bE116E23 on chr=9; Num_of_Contigs=6; )
CASP4 location ⇒ 9:34929344-34929244   CU855956,CH242-116E23,9:34921850-34933245
(Clone quality: bE116E23 on chr=9; Num_of_Contigs=6; )
CASP4 location ⇒ 9:34934180-34933984   CU855956,CH242-116E23,9:34933346-35042600
(Clone quality: bE116E23 on chr=9; Num_of_Contigs=6; )
CASP4 location ⇒ 9:34950993-34950917   CU855956,CH242-116E23,9:34933346-35042600
(Clone quality: bE116E23 on chr=9; Num_of_Contigs=6; )
CASP5 location ⇒ 9:34927552-34926730   CU855956,CH242-116E23,9:34921850-34933245
(Clone quality: bE116E23 on chr=9; Num_of_Contigs=6; )
CASP5 location ⇒ 9:34934220-34933984   CU855956,CH242-116E23,9:34933346-35042600
(Clone quality: bE116E23 on chr=9; Num_of_Contigs=6; )
CASP5 location ⇒ 9:34935819-34935668   CU855956,CH242-116E23,9:34933346-35042600
(Clone quality: bE116E23 on chr=9; Num_of_Contigs=6; )
CASP5 location ⇒ 9:34941212-34940977   CU855956,CH242-116E23,9:34933346-35042600
(Clone quality: bE116E23 on chr=9; Num_of_Contigs=6; )
CASP6 location ⇒ 8:96725285-96725435   CU694741,CH242-514C2,8:96712621-96726662
(Clone quality: bE514C2 on chr=8; Num_of_Contigs=10; )
CASP6 location ⇒ 8:96727505-96727682   CU694741,CH242-514C2,8:96726763-96744196
(Clone quality: bE514C2 on chr=8; Num_of_Contigs=10; )
CASP6 location ⇒ 8:96730957-96731121   CU694741,CH242-514C2,8:96726763-96744196
(Clone quality: bE514C2 on chr=8; Num_of_Contigs=10; )
CASP6 location ⇒ 8:96734898-96735107   CU694741,CH242-514C2,8:96726763-96744196
(Clone quality: bE514C2 on chr=8; Num_of_Contigs=10; )
CASP7 location ⇒ 14:129913429-129913566   CU012038,CH242-328H13,14:129818796-130012065
(Clone quality: bE328H13 on chr=14; Num_of_Contigs=2; )
CASP7 location ⇒ 14:129917043-129917221   CU012038,CH242-328H13,14:129818796-130012065
(Clone quality: bE328H13 on chr=14; Num_of_Contigs=2; )
CASP7 location ⇒ 14:129919882-129921492   CU012038,CH242-328H13,14:129818796-130012065
(Clone quality: bE328H13 on chr=14; Num_of_Contigs=2; )
Go to records:
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Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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