A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Records 2101 - 2200:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
CBX8   ENSSSCG00000017161 12:1769595-1771952   FP236795,CH242-62A6,12:1768960-1772450
(Clone quality: bE62A6 on chr=12; Num_of_Contigs=13; )
CBY3   ENSSSCG00000014021 2:68279165-68279566   CU915704,CH242-394M22,2:68275757-68351064
(Clone quality: bE394M22 on chr=2; Num_of_Contigs=5; )
CC2D1A   ENSSSCG00000013761 2:56916863-56933585   FP016000,CH242-10C10,2:56824783-56952713
(Clone quality: bE10C10 on chr=2; Num_of_Contigs=2; )
CC2D1B   ENSSSCG00000003862 6:113635952-113649304    
CC2D2A ENSSSCG00000008738 8:7983627-8131883    
CCBE1   ENSSSCG00000004907 1:168405537-168442891    
CCBL1   ENSSSCG00000005663 1:283846900-283883788    
CCBL2   ENSSSCG00000006925 4:132106877-132163150   CU151869,CH242-289B10,4:132020285-132181322
(Clone quality: bE289B10 on chr=4; Num_of_Contigs=2; )
CCBP2 ENSSSCG00000011289 13:22127196-22128347   CU466505,CH242-515M14,13:22123386-22182273
(Clone quality: bE515M14 on chr=13; Num_of_Contigs=3; )
CCDC102B   ENSSSCG00000004883 1:160889427-160901494   CU915525,CH242-7L4,1:160884005-160919579
(Clone quality: bE7L4 on chr=1; Num_of_Contigs=10; )
CCDC103   ENSSSCG00000017345 12:16332412-16336502   CU896578,CH242-101E18,12:16315123-16339681
(Clone quality: bE101E18 on chr=12; Num_of_Contigs=7; )
CCDC104   ENSSSCG00000008400 3:79737733-79763154    
CCDC105   ENSSSCG00000013834 2:60134107-60145192   CU915718,CH242-156C19,2:60080233-60146626
(Clone quality: bE156C19 on chr=2; Num_of_Contigs=6; )
CCDC107   ENSSSCG00000005313 1:247472968-247476009   CU062658,CH242-97C14,1:247426659-247546707
(Clone quality: bE97C14 on chr=1; Num_of_Contigs=2; )
CCDC109A   ENSSSCG00000010290 14:78779843-79116317    
CCDC109B   ENSSSCG00000009141 8:96737112-96753889    
CCDC11   ENSSSCG00000004515 1:102905469-102928901   CU914451,CH242-152J17,1:102889373-103019647
(Clone quality: bE152J17 on chr=1; Num_of_Contigs=3; )
CCDC110 ENSSSCG00000015795 15:43743435-43751271   CU571359,CH242-312E7,15:43699298-43786916
(Clone quality: bE312E7 on chr=15; Num_of_Contigs=3; )
CCDC111   ENSSSCG00000015786 15:43028193-43074054    
CCDC113   ENSSSCG00000002803 6:19510434-19519941   FP102099,CH242-149H9,6:19510295-19556098
(Clone quality: bE149H9 on chr=6; Num_of_Contigs=10; )
CCDC115   ENSSSCG00000015737 15:29172998-29176420   CU606932,CH242-515L21,15:29170199-29176525
(Clone quality: bE515L21 on chr=15; Num_of_Contigs=27; )
CCDC116   ENSSSCG00000010086 14:51330256-51333544   CU633431,CH242-79C11,14:51180713-51414471
(Clone quality: bE79C11 on chr=14; Num_of_Contigs=4; )
CCDC120   ENSSSCG00000012288 X:42573795-42582129    
CCDC121   ENSSSCG00000008547 3:104191041-104192024   CU972435,CH242-399O12,3:104165318-104194695
(Clone quality: bE399O12 on chr=3; Num_of_Contigs=8; )
CCDC122   ENSSSCG00000009426 11:22289352-22479921    
CCDC124   ENSSSCG00000013891 2:62179572-62189501   CU463003,CH242-317A24,2:62151810-62279750
(Clone quality: bE317A24 on chr=2; Num_of_Contigs=2; )
CCDC129   ENSSSCG00000016671 18:39976741-40056956    
CCDC130   ENSSSCG00000013755 2:56797201-56813176   CU855962,CH242-129F14,2:56772208-56824782
(Clone quality: bE129F14 on chr=2; Num_of_Contigs=2; )
CCDC132   ENSSSCG00000015321 9:68590255-68596067   CU915449,CH242-148H14,9:68588974-68600714
(Clone quality: bE148H14 on chr=9; Num_of_Contigs=6; )
CCDC135   ENSSSCG00000002817 6:20022778-20034724   CU467555,CH242-299M23,6:20022123-20035456
(Clone quality: bE299M23 on chr=6; Num_of_Contigs=20; )
CCDC136   ENSSSCG00000016579 18:18019674-18050395    
CCDC138   ENSSSCG00000008135 3:42743805-42792929    
CCDC141 ENSSSCG00000016002 15:79539873-79672587    
CCDC142   ENSSSCG00000008279 3:63106355-63118650    
CCDC146   ENSSSCG00000015412 9:95683152-95711811   CU595290,CH242-102O8,9:95662713-95713618
(Clone quality: bE102O8 on chr=9; Num_of_Contigs=11; )
CCDC147   ENSSSCG00000010614 14:120414318-120436593    
CCDC148   ENSSSCG00000015876 15:60708315-60871986    
CCDC15   ENSSSCG00000015206 9:50604910-50673207    
CCDC150   ENSSSCG00000016071 15:94383376-94407408    
CCDC151   ENSSSCG00000013626 2:52389052-52397517   CU855518,CH242-272A5,2:52374247-52417356
(Clone quality: bE272A5 on chr=2; Num_of_Contigs=10; )
CCDC152   ENSSSCG00000016867 16:24824416-24890984   CU972496,CH242-40I2,16:24766459-24926535
(Clone quality: bE40I2 on chr=16; Num_of_Contigs=1; )
CCDC153   ENSSSCG00000015109 9:44888680-45024114    
CCDC155   ENSSSCG00000003172 6:38042735-38066751    
CCDC157   ENSSSCG00000010003 14:48150445-48158791   CT956025,CH242-69C12,14:48142322-48239134
(Clone quality: bE69C12 on chr=14; Num_of_Contigs=15; )
CCDC158   ENSSSCG00000008983 8:61425051-61541461    
CCDC159   ENSSSCG00000013621 2:52301019-52308092    
CCDC160   ENSSSCG00000012681 X:108268025-108268990 FP015951,CH242-54G11,X:108183838-108371118
(Clone quality: bE54G11 on chr=X; Num_of_Contigs=1; )
 
CCDC163P   ENSSSCG00000003916 6:118790362-118794033   CU442720,CH242-94F19,6:118759178-118889484
(Clone quality: bE94F19 on chr=6; Num_of_Contigs=3; )
CCDC18   ENSSSCG00000006897 4:128224549-128320897    
CCDC19   ENSSSCG00000006394 4:93902473-93922607   CU856127,CH242-86L20,4:93898168-93927205
(Clone quality: bE86L20 on chr=4; Num_of_Contigs=6; )
CCDC22   ENSSSCG00000012297 X:42740625-42759236   FP067430,CH242-266D21,X:42733839-42767607
(Clone quality: bE266D21 on chr=X; Num_of_Contigs=12; )
CCDC23   ENSSSCG00000006772 4:112022351-112022551   CU463248,CH242-400P6,4:112002441-112085502
(Clone quality: bE400P6 on chr=4; Num_of_Contigs=4; )
CCDC25   ENSSSCG00000009669 14:11514449-11523936   CU656007,CH242-32D13,14:11512232-11583414
(Clone quality: bE32D13 on chr=14; Num_of_Contigs=2; )
CCDC28A ENSSSCG00000004148 1:26978663-26995104   CU633664,CH242-223F5,1:26965246-27006535
(Clone quality: bE223F5 on chr=1; Num_of_Contigs=6; )
CCDC28B   ENSSSCG00000003618 6:60933562-61020268    
CCDC3   ENSSSCG00000011110 10:56028725-56115898    
CCDC30   ENSSSCG00000003965 6:120956915-121039983    
CCDC33   ENSSSCG00000001908 7:64681680-64712933 CT797479,CH242-196N13,7:64639731-64852331
(Clone quality: bE196N13 on chr=7; Num_of_Contigs=2; )
 
CCDC34   ENSSSCG00000013336 2:31019014-31056128 CU466955,CH242-220A17,2:30959779-31177028
(Clone quality: bE220A17 on chr=2; Num_of_Contigs=6; )
 
CCDC36   ENSSSCG00000011376 13:26707792-26741224   CU856115,CH242-45E6,13:26688217-26742695
(Clone quality: bE45E6 on chr=13; Num_of_Contigs=7; )
CCDC37   ENSSSCG00000001826 7:59256149-59285824   CU571146,CH242-69O5,7:59247143-59315417
(Clone quality: bE69O5 on chr=7; Num_of_Contigs=5; )
CCDC38   ENSSSCG00000000894 5:82616816-82631628    
CCDC39   ENSSSCG00000011768 13:90272182-90327141    
CCDC40   ENSSSCG00000017158 12:1452610-1493415 CU464073,CH242-396G1,12:1427255-1662757
(Clone quality: bE396G1 on chr=3; Num_of_Contigs=9; )
 
CCDC42   ENSSSCG00000017988 12:50885065-50899353    
CCDC42B   ENSSSCG00000009875 14:38997324-39004361    
CCDC46   ENSSSCG00000017266 12:10478921-10636923    
CCDC50   ENSSSCG00000011817 13:96875924-96941480    
CCDC51   ENSSSCG00000011350 13:26066164-26076189    
CCDC54   ENSSSCG00000014200 2:104527850-104528173   CU972447,CH242-66J20,2:104518479-104533746
(Clone quality: bE66J20 on chr=2; Num_of_Contigs=7; )
CCDC55   ENSSSCG00000017795 12:44150212-44217911    
CCDC56   ENSSSCG00000017388 12:17663493-17664611   CU928483,CH242-17I6,12:17641484-17682744
(Clone quality: bE17I6 on chr=12; Num_of_Contigs=8; )
CCDC59   ENSSSCG00000000942 5:95521452-95526833   FP103100,CH242-512N7,5:95516384-95534712
(Clone quality: bE512N7 on chr=5; Num_of_Contigs=7; )
CCDC6   ENSSSCG00000010211 14:65804686-65924417    
CCDC60   ENSSSCG00000009842 14:33362990-33549867    
CCDC61   ENSSSCG00000003100 6:36259507-36337804    
CCDC62 ENSSSCG00000009787 14:30104686-30142146    
CCDC63   ENSSSCG00000009829 14:32184521-32235330    
CCDC64   ENSSSCG00000009896 14:40150998-40268797   CU062612,CH242-93C5,14:40150672-40322842
(Clone quality: bE93C5 on chr=14; Num_of_Contigs=2; )
CCDC65   ENSSSCG00000000179 5:13544774-13552649    
CCDC68   ENSSSCG00000004534 1:107273648-107306982   CU469481,CH242-280O12,1:107132216-107314734
(Clone quality: bE280O12 on chr=1; Num_of_Contigs=1; )
CCDC70   ENSSSCG00000009383 11:16073726-16074418   CU856026,CH242-272H15,11:16072068-16078470
(Clone quality: bE272H15 on chr=11; Num_of_Contigs=15; )
CCDC71   ENSSSCG00000011378 13:26771165-26772577   CU856115,CH242-45E6,13:26748496-26786404
(Clone quality: bE45E6 on chr=13; Num_of_Contigs=7; )
CCDC72   ENSSSCG00000011351 13:26076233-26078942   FP102065,CH242-145E9,13:26070359-26088378
(Clone quality: bE145E9 on chr=13; Num_of_Contigs=12; )
CCDC75   ENSSSCG00000008497 3:96193433-96205293   CU487215,CH242-226P20,3:96159197-96242245
(Clone quality: bE226P20 on chr=3; Num_of_Contigs=5; )
CCDC76   ENSSSCG00000006869 4:122853285-122865731   CU137727,CH242-139N24,4:122852953-122865826
(Clone quality: bE139N24 on chr=4; Num_of_Contigs=16; )
CCDC77   ENSSSCG00000000751 5:63512603-63515938   FP102715,CH242-509N10,5:63512295-63521618
(Clone quality: bE509N10 on chr=5; Num_of_Contigs=14; )
CCDC80   ENSSSCG00000011928 13:109781535-109818740   CU633371,CH242-228G19,13:109724885-109839599
(Clone quality: bE228G19 on chr=13; Num_of_Contigs=4; )
CCDC81   ENSSSCG00000014917 9:20477416-20528277    
CCDC82   ENSSSCG00000014972 9:28945703-28969864    
CCDC83   ENSSSCG00000014912 9:20006319-20068039    
CCDC84   ENSSSCG00000015102 9:44820879-44830008   CU695209,CH242-241K21,9:44763573-44853404
(Clone quality: bE241K21 on chr=9; Num_of_Contigs=5; )
CCDC85A   ENSSSCG00000008396 3:78802518-79005245    
CCDC85B   ENSSSCG00000012968 2:4814406-4815014   CU928325,CH242-208C18,2:4805866-4836669
(Clone quality: bE208C18 on chr=2; Num_of_Contigs=5; )
CCDC86   ENSSSCG00000013105 2:9243698-9252370   CU861565,CH242-480L10,2:9238313-9266378
(Clone quality: bE480L10 on chr=2; Num_of_Contigs=15; )
CCDC87   ENSSSCG00000012933 2:4119142-4121715   CU928093,CH242-168G1,2:4114600-4125297
(Clone quality: bE168G1 on chr=2; Num_of_Contigs=25; )
CCDC88A   ENSSSCG00000008406 3:79937800-80024315    
CCDC88B   ENSSSCG00000013042 2:6275170-6289472    
CCDC88C   ENSSSCG00000002440 7:120781577-120909080    
CCDC89   ENSSSCG00000014908 9:19858624-19859745   CU928672,CH242-451F17,9:19839178-19863160
(Clone quality: bE451F17 on chr=9; Num_of_Contigs=3; )
Go to records:
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Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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