A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Records 8601 - 8700:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
PATZ1 ENSSSCG00000010027 14:48961261-48978020    
PAWR ENSSSCG00000000947 5:96160284-96205182    
PAX3 ENSSSCG00000016229 15:115564634-115567687   CU469322,CH242-212J4,15:115564264-115568806
(Clone quality: bE212J4 on chr=15; Num_of_Contigs=23; )
PAX4   ENSSSCG00000016591 18:18800949-18805170   CU861978,CH242-2M6,18:18763764-18883603
(Clone quality: bE2M6 on chr=18; Num_of_Contigs=4; )
PAX5 ENSSSCG00000005345 1:248884989-249152155    
PAX6   ENSSSCG00000013320 2:26933326-26955190    
PAX9   ENSSSCG00000001943 7:69403390-69416839    
PBK   ENSSSCG00000009671 14:11573505-11578813   CU656007,CH242-32D13,14:11512232-11583414
(Clone quality: bE32D13 on chr=14; Num_of_Contigs=2; )
PBRM1   ENSSSCG00000011445 13:29300894-29388582    
PBX1 ENSSSCG00000000881 5:80003131-80017378    
PBX1 ENSSSCG00000006331 4:89472001-89943215    
PBX2 ENSSSCG00000001438 7:28060959-28066345 CT954269,CH242-404E7,7:27953077-28153182
(Clone quality: bE404E7 on chr=7; Num_of_Contigs=12; ) 		 
PBX3 ENSSSCG00000005604 1:281081050-281136530   CU582819,CH242-6D18,1:280969881-281144863
(Clone quality: bE6D18 on chr=1; Num_of_Contigs=1; )
PBX4 ENSSSCG00000013933 2:63443777-63452452   FP015820,CH242-73N10,2:63437356-63592582
(Clone quality: bE73N10 on chr=2; Num_of_Contigs=2; )
PBXIP1 ENSSSCG00000006536 4:98883525-98886001   CU207227,CH242-365J2,4:98865848-98886544
(Clone quality: bE365J2 on chr=4; Num_of_Contigs=9; )
PC   ENSSSCG00000012926 2:3943363-3948616   FP089559,CH242-217L14,2:3940112-3995454
(Clone quality: bE217L14 on chr=2; Num_of_Contigs=11; )
PCBD1   ENSSSCG00000010275 14:76952143-76958632 CT737289,CH242-133B3,14:76783692-76995335
(Clone quality: bE133B3 on chr=14; Num_of_Contigs=4; ) 		 
PCCA   ENSSSCG00000009522 11:69981944-70161872    
PCCB   ENSSSCG00000011651 13:63348974-63383844    
PCDH12 ENSSSCG00000014395 2:130462272-130474962   FP102264,CH242-59H11,2:130351429-130495395
(Clone quality: bE59H11 on chr=2; Num_of_Contigs=3; )
PCDH15 ENSSSCG00000010426 14:100197944-100670231    
PCDH17 ENSSSCG00000009446 11:29515386-29603162    
PCDH18 ENSSSCG00000009065 8:76523747-76535701   CU468494,CH242-352D19,8:76522147-76540131
(Clone quality: bE352D19 on chr=8; Num_of_Contigs=8; )
PCDH19 ENSSSCG00000012479 X:75415113-75495406    
PCDH21 ENSSSCG00000010348 14:88876118-88898171   CU607038,CH242-240O5,14:88865868-89075009
(Clone quality: bE240O5 on chr=14; Num_of_Contigs=1; )
PCDH24   ENSSSCG00000014055 2:70338038-70367840 FP101981,CH242-191F5,2:70304317-70501298
(Clone quality: bE191F5 on chr=2; Num_of_Contigs=3; ) 		 
PCDH8 ENSSSCG00000009445 11:27151836-27155805    
PCDHB1 ENSSSCG00000014377 2:129484237-129486690   CU582771,CH242-139E18,2:129476567-129508714
(Clone quality: bE139E18 on chr=2; Num_of_Contigs=14; )
PCDHB15 ENSSSCG00000014379 2:129666362-129668761   CU972421,CH242-169A19,2:129662788-129681591
(Clone quality: bE169A19 on chr=2; Num_of_Contigs=19; )
PCDHB2   ENSSSCG00000014380 2:129711091-129819833    
PCDHB4   ENSSSCG00000014378 2:129582734-129585434    
PCDHGA12   ENSSSCG00000014386 2:130044861-130047182   CU468962,CH242-385J20,2:130042453-130048607
(Clone quality: bE385J20 on chr=2; Num_of_Contigs=15; )
PCDHGC5 ENSSSCG00000014385 2:129887520-130064352    
PCF11   ENSSSCG00000014901 9:17366234-17392430    
PCGF1 ENSSSCG00000008277 3:63083177-63085659   CU468647,CH242-164C3,3:63071721-63110155
(Clone quality: bE164C3 on chr=3; Num_of_Contigs=12; )
PCGF3   ENSSSCG00000008672 8:40326-43297   FP102972,CH242-47L5,8:39031-43407
(Clone quality: bE47L5 on chr=8; Num_of_Contigs=13; )
PCGF5   ENSSSCG00000010462 14:107837673-107899751   CU656022,CH242-437I1,14:107776412-107956298
(Clone quality: bE437I1 on chr=14; Num_of_Contigs=1; )
PCGF6   ENSSSCG00000010596 14:119377001-119401958    
PCID2   ENSSSCG00000009557 11:78871431-78886876   FP236214,CH242-266L11,11:78807891-78889241
(Clone quality: bE266L11 on chr=11; Num_of_Contigs=10; )
PCIF1   ENSSSCG00000007433 17:50200789-50212380   CU407252,CH242-441N18,17:50187934-50215613
(Clone quality: bE441N18 on chr=17; Num_of_Contigs=7; )
PCK2   ENSSSCG00000002009 7:81528029-81538448   CT961055,CH242-32K2,7:81442434-81553552
(Clone quality: bE32K2 on chr=7; Num_of_Contigs=2; )
PCLKC ENSSSCG00000014055 2:70338038-70367840 FP101981,CH242-191F5,2:70304317-70501298
(Clone quality: bE191F5 on chr=2; Num_of_Contigs=3; ) 		 
PCLO   ENSSSCG00000015401 9:90684965-91078418    
PCM1   ENSSSCG00000006994 17:5733931-5751497   CU915455,CH242-181E13,17:5733285-5759705
(Clone quality: bE181E13 on chr=17; Num_of_Contigs=4; )
PCMT1 ENSSSCG00000004103 1:17161761-17232353    
PCMTD1   ENSSSCG00000006267 4:81062167-81093696    
PCNP   ENSSSCG00000011955 13:115643183-115660192   CU633680,CH242-251F9,13:115560062-115745735
(Clone quality: bE251F9 on chr=13; Num_of_Contigs=2; )
PCNX   ENSSSCG00000002330 7:102838376-102951722   CT841685,CH242-227F9,7:102835138-103015707
(Clone quality: bE227F9 on chr=7; Num_of_Contigs=1; )
PCNXL2   ENSSSCG00000010165 14:58980219-59269450    
PCNXL3   ENSSSCG00000012983 2:5016425-5025292   CU914305,CH242-95H15,2:5007151-5027868
(Clone quality: bE95H15 on chr=2; Num_of_Contigs=19; )
PCOLCE2   ENSSSCG00000011683 13:68109008-68193664    
PCP2   ENSSSCG00000013580 2:51147843-51149709   CU929919,CH242-334A8,2:51145935-51174431
(Clone quality: bE334A8 on chr=2; Num_of_Contigs=7; )
PCSK1   ENSSSCG00000014169 2:92001906-92024579    
PCSK2   ENSSSCG00000007083 17:26293939-26554239    
PCSK5   ENSSSCG00000005275 1:239615943-239706811    
PCSK6   ENSSSCG00000005783 1:292192711-292222288    
PCSK7   ENSSSCG00000015072 9:43264186-43289723   CU633260,CH242-267D22,9:43263576-43314400
(Clone quality: bE267D22 on chr=9; Num_of_Contigs=9; )
PCTK1   ENSSSCG00000012269 X:41755754-41761927   FP015877,CH242-127N16,X:41748540-41773689
(Clone quality: bE127N16 on chr=X; Num_of_Contigs=6; )
PCTK2 ENSSSCG00000015290 9:63236256-63239434   FP102849,CH242-21K8,9:63234146-63239626
(Clone quality: bE21K8 on chr=9; Num_of_Contigs=13; )
PCTK3   ENSSSCG00000015290 9:63236256-63239434   FP102849,CH242-21K8,9:63234146-63239626
(Clone quality: bE21K8 on chr=9; Num_of_Contigs=13; )
PCTP   ENSSSCG00000017608 12:29655525-29826571    
PCYOX1   ENSSSCG00000008330 3:66282292-66284976   CU929337,CH242-249L10,3:66281660-66288737
(Clone quality: bE249L10 on chr=3; Num_of_Contigs=18; )
PCYOX1L   ENSSSCG00000014433 2:135978102-135989151   CU694929,CH242-55J13,2:135975430-136052686
(Clone quality: bE55J13 on chr=2; Num_of_Contigs=3; )
PCYT1A   ENSSSCG00000011845 13:100603224-100649430 CU695181,CH242-182C12,13:100594044-100802412
(Clone quality: bE182C12 on chr=13; Num_of_Contigs=21; ) 		 
PCYT1B   ENSSSCG00000012182 X:19488914-19596445    
PDC   ENSSSCG00000015578 9:119945639-119952560   CU657929,CH242-301H1,9:119854087-120036038
(Clone quality: bE301H1 on chr=9; Num_of_Contigs=1; )
PDCD10 ENSSSCG00000011739 13:81556006-81596704    
PDCD1LG2 ENSSSCG00000005210 1:226477241-226503352    
PDCD2L   ENSSSCG00000002875 6:29459641-29482601   CU929776,CH242-347I7,6:29450852-29482800
(Clone quality: bE347I7 on chr=6; Num_of_Contigs=4; )
PDCD4 ENSSSCG00000010627 14:126902476-126931666   CT737336,CH242-143P15,14:126897173-127111088
(Clone quality: bE143P15 on chr=14; Num_of_Contigs=1; )
PDCD5 ENSSSCG00000002860 6:28513318-28521227   FP102642,CH242-236J21,6:28490537-28523128
(Clone quality: bE236J21 on chr=6; Num_of_Contigs=9; )
PDCD7 ENSSSCG00000004926 1:170190008-170202756   CU856492,CH242-206L6,1:170178720-170216975
(Clone quality: bE206L6 on chr=1; Num_of_Contigs=2; )
PDCL   ENSSSCG00000005574 1:278246472-278256325   CU075436,CH242-173A3,1:278242304-278277447
(Clone quality: bE173A3 on chr=1; Num_of_Contigs=10; )
PDCL2   ENSSSCG00000008908 8:47695056-47727197   CU861936,CH242-17G22,8:47684923-47735424
(Clone quality: bE17G22 on chr=8; Num_of_Contigs=6; )
PDCL3   ENSSSCG00000008172 3:49433796-49444341    
PDDC1   ENSSSCG00000012846 2:185919-191739   FP015900,CH242-40P17,2:170992-201722
(Clone quality: bE40P17 on chr=2; Num_of_Contigs=6; )
PDE10A   ENSSSCG00000004027 1:3953692-4177717    
PDE11A   ENSSSCG00000015995 15:78480014-78700357    
PDE12   ENSSSCG00000011465 13:32979127-32982436   CU467952,CH242-20F23,13:32971201-32987153
(Clone quality: bE20F23 on chr=13; Num_of_Contigs=11; )
PDE1B   ENSSSCG00000000297 5:18292784-18318461    
PDE1C   ENSSSCG00000016668 18:39685792-39728417   CU468582,CH242-180I1,18:39664209-39729139
(Clone quality: bE180I1 on chr=18; Num_of_Contigs=4; )
PDE2A   ENSSSCG00000014816 9:6767590-6795745    
PDE3A ENSSSCG00000000586 5:50415643-50469193    
PDE3B   ENSSSCG00000013388 2:41398134-41476140    
PDE4A ENSSSCG00000013641 2:52935390-53086202    
PDE4B ENSSSCG00000003805 6:102857699-102900332    
PDE4C   ENSSSCG00000013898 2:62369056-62376257    
PDE4D   ENSSSCG00000016929 16:35869361-36106905    
PDE4DIP   ENSSSCG00000006707 4:104825079-104948365   CU468525,CH242-91D20,4:104823540-104986257
(Clone quality: bE91D20 on chr=4; Num_of_Contigs=8; )
PDE6A   ENSSSCG00000014438 2:136367690-136425357    
PDE6C   ENSSSCG00000010480 14:110317141-110402865    
PDE6D   ENSSSCG00000016279 15:124682278-124732189    
PDE6H   ENSSSCG00000000603 5:54867862-54872405    
PDE7A ENSSSCG00000006218 4:71451501-71475034    
PDE7B   ENSSSCG00000004165 1:29372663-29546435    
PDE8B   ENSSSCG00000014097 2:75103125-75221059    
PDE9A   ENSSSCG00000012085 13:144797613-144911947    
PDGFA ENSSSCG00000007541 3:3109-20763    
PDGFC ENSSSCG00000008871 8:39641095-39655063   CU694633,CH242-50J11,8:39612409-39672403
(Clone quality: bE50J11 on chr=8; Num_of_Contigs=3; )
PDGFD   ENSSSCG00000014994 9:34066339-34352584    
Go to records:
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Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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