A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Records 9201 - 9300:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
PPP1R15B   ENSSSCG00000015282 9:62648375-62655063   CU463238,CH242-21I11,9:62624994-62656733
(Clone quality: bE21I11 on chr=9; Num_of_Contigs=4; )
PPP1R16A   ENSSSCG00000005901 4:419804-423949   CU468594,CH242-10O17,4:360104-442995
(Clone quality: bE10O17 on chr=4; Num_of_Contigs=10; )
PPP1R16B   ENSSSCG00000007350 17:44067558-44148986   CU074389,CH242-105J10,17:44015909-44155339
(Clone quality: bE105J10 on chr=17; Num_of_Contigs=5; )
PPP1R1A   ENSSSCG00000000298 5:18322895-18325689   CU457442,CH242-280E10,5:18321215-18329017
(Clone quality: bE280E10 on chr=5; Num_of_Contigs=18; )
PPP1R1B   ENSSSCG00000017498 12:20579679-20587050   CU640399,CH242-251F23,12:20578579-20644206
(Clone quality: bE251F23 on chr=12; Num_of_Contigs=5; )
PPP1R1C   ENSSSCG00000016014 15:82058849-82060662   CU464031,CH242-439P1,15:82036866-82066712
(Clone quality: bE439P1 on chr=15; Num_of_Contigs=2; )
PPP1R2 ENSSSCG00000011830 13:99616961-99635515   CU582896,CH242-39I7,13:99614653-99649103
(Clone quality: bE39I7 on chr=13; Num_of_Contigs=5; )
PPP1R2 ENSSSCG00000012256 X:38006993-38007586   FP101956,CH242-132C3,X:38002599-38009631
(Clone quality: bE132C3 on chr=X; Num_of_Contigs=33; )
PPP1R3B   ENSSSCG00000015852 15:53094713-53095567   CU915454,CH242-177B14,15:53071770-53114679
(Clone quality: bE177B14 on chr=15; Num_of_Contigs=10; )
PPP1R3C   ENSSSCG00000010464 14:108395001-108398066   CU468441,CH242-68K21,14:108305821-108479531
(Clone quality: bE68K21 on chr=14; Num_of_Contigs=1; )
PPP1R3D   ENSSSCG00000007530 17:62582453-62583352   CU915385,CH242-197I13,17:62578020-62643589
(Clone quality: bE197I13 on chr=17; Num_of_Contigs=8; )
PPP1R3E   ENSSSCG00000002021 7:82037079-82038517   CU633625,CH242-116C14,7:81989794-82038828
(Clone quality: bE116C14 on chr=7; Num_of_Contigs=8; )
PPP1R3G   ENSSSCG00000000997 7:1637178-1638060   CU694314,CH242-197B15,7:1595463-1729252
(Clone quality: bE197B15 on chr=7; Num_of_Contigs=3; )
PPP1R7   ENSSSCG00000016376 15:132053136-132063734    
PPP1R9A ENSSSCG00000015329 9:69914784-69916181   CU915625,CH242-136K1,9:69912209-69917925
(Clone quality: bE136K1 on chr=9; Num_of_Contigs=12; )
PPP1R9A ENSSSCG00000015330 9:70143845-70145786    
PPP1R9B   ENSSSCG00000017584 12:24727275-24742760    
PPP2CA ENSSSCG00000014298 2:124265735-124274659    
PPP2CB   ENSSSCG00000015842 15:51239504-51256231   CU855604,CH242-134L11,15:51228220-51331802
(Clone quality: bE134L11 on chr=15; Num_of_Contigs=7; )
PPP2R2A ENSSSCG00000009657 14:10337015-10424743    
PPP2R2C   ENSSSCG00000008712 8:2353771-2498628    
PPP2R3A   ENSSSCG00000011649 13:63235906-63245845   CU633269,CH242-284K19,13:63235289-63247380
(Clone quality: bE284K19 on chr=13; Num_of_Contigs=6; )
PPP2R3C   ENSSSCG00000001953 7:70579520-70579705   CU469145,CH242-277H7,7:70578492-70658893
(Clone quality: bE277H7 on chr=7; Num_of_Contigs=4; )
PPP2R4   ENSSSCG00000005672 1:284076470-284104923   CU041302,CH242-13F23,1:284074391-284292479
(Clone quality: bE13F23 on chr=1; Num_of_Contigs=6; )
PPP2R5A   ENSSSCG00000015599 9:123467265-123539036    
PPP2R5B   ENSSSCG00000013016 2:5648173-5655110   CU606982,CH242-431G15,2:5575891-5703518
(Clone quality: bE431G15 on chr=2; Num_of_Contigs=4; )
PPP2R5C   ENSSSCG00000002540 7:131904751-132005920    
PPP2R5D   ENSSSCG00000001654 7:43902567-43925408 CR956379,CH242-196P11,7:43779717-43958428
(No clone quality info on bE196P11) 		 
PPP2R5E   ENSSSCG00000005113 1:203500553-203556827    
PPP3CA ENSSSCG00000009172 8:102532923-102613200    
PPP3CB ENSSSCG00000010301 14:79553070-79606556   CT867945,CH242-262J5,14:79481277-79661085
(Clone quality: bE262J5 on chr=14; Num_of_Contigs=2; )
PPP3CC ENSSSCG00000009624 14:6695108-6748444    
PPP4R1L   ENSSSCG00000007512 17:61040742-61061698 CR956359,CH242-256J18,17:60938475-61076184
(No clone quality info on bE256J18) 		 
PPP5C   ENSSSCG00000003098 6:36181393-36204262    
PPP6C   ENSSSCG00000005600 1:280745798-280769960   CU041411,CH242-95A24,1:280727173-280776523
(Clone quality: bE95A24 on chr=1; Num_of_Contigs=8; )
PPPDE1   ENSSSCG00000010876 10:16961130-16981282   CU571186,CH242-132I12,10:16943285-17006969
(Clone quality: bE132I12 on chr=10; Num_of_Contigs=2; )
PPPDE2   ENSSSCG00000000060 5:3474339-3497158    
PPRC1   ENSSSCG00000010575 14:118117579-118133378   CT737175,CH242-202A24,14:118086409-118163897
(Clone quality: bE202A24 on chr=14; Num_of_Contigs=4; )
PPT1   ENSSSCG00000003671 6:66044461-66063462 CR974432,PigE-204L22,6:65914672-66073853
(No clone quality info on bT204L22) 		 
PPT2 ENSSSCG00000001433 7:28027719-28040084 CT954269,CH242-404E7,7:27953077-28153182
(Clone quality: bE404E7 on chr=7; Num_of_Contigs=12; ) 		 
PPTC7 ENSSSCG00000009825 14:31936053-31973788    
PPY   ENSSSCG00000017368 12:17132651-17133285   CU914436,CH242-507H4,12:17130148-17144522
(Clone quality: bE507H4 on chr=12; Num_of_Contigs=9; )
PPYR1   ENSSSCG00000010369 14:92000565-92002360   CU633482,CH242-183G20,14:91954577-92014278
(Clone quality: bE183G20 on chr=14; Num_of_Contigs=5; )
PQLC1   ENSSSCG00000005779 1:291035927-291092499   CU041273,CH242-39O17,1:291029585-291098409
(Clone quality: bE39O17 on chr=1; Num_of_Contigs=4; )
PQLC2   ENSSSCG00000003492 6:53265230-53280778    
PQLC3   ENSSSCG00000008631 3:116314872-116326912   CU915597,CH242-518I17,3:116314671-116336502
(Clone quality: bE518I17 on chr=3; Num_of_Contigs=9; )
PRAF2   ENSSSCG00000012289 X:42583896-42586466   FP067404,CH242-247J8,X:42575088-42641365
(Clone quality: bE247J8 on chr=X; Num_of_Contigs=5; )
PRAME   ENSSSCG00000010043 14:49864292-49867589   CU467669,CH242-141B5,14:49851532-49926359
(Clone quality: bE141B5 on chr=14; Num_of_Contigs=7; )
PRAP1   ENSSSCG00000010792 14:148503108-148506987   CU570809,CH242-121F20,14:148499673-148510138
(Clone quality: bE121F20 on chr=14; Num_of_Contigs=15; )
PRC1 ENSSSCG00000010883 10:18785448-18794334    
PRCC   ENSSSCG00000006467 4:96990577-97017676    
PRCP   ENSSSCG00000014899 9:17122742-17157369   CU929487,CH242-68O18,9:17122524-17168610
(Clone quality: bE68O18 on chr=9; Num_of_Contigs=8; )
PRDM1 ENSSSCG00000004369 1:75734444-75755436   CU041281,CH242-47G3,1:75697101-75818068
(Clone quality: bE47G3 on chr=1; Num_of_Contigs=2; )
PRDM10 ENSSSCG00000015243 9:55082193-55171542    
PRDM11   ENSSSCG00000013276 2:15601504-15646859    
PRDM12   ENSSSCG00000005703 1:285905408-285921415    
PRDM13   ENSSSCG00000004354 1:69898485-69905990    
PRDM14   ENSSSCG00000006195 4:67454450-67475663    
PRDM15   ENSSSCG00000012084 13:144758647-144800621    
PRDM2   ENSSSCG00000003453 6:50485172-50499719   CU694706,CH242-284G6,6:50484583-50503630
(Clone quality: bE284G6 on chr=6; Num_of_Contigs=12; )
PRDM4   ENSSSCG00000000160 5:10821167-10849747    
PRDM5   ENSSSCG00000009101 8:88779615-88866662    
PRDM8   ENSSSCG00000009255 8:118701381-118703793   FP103094,CH242-235G2,8:118699918-118703794
(Clone quality: bE235G2 on chr=8; Num_of_Contigs=16; )
PRDX1 ENSSSCG00000003914 6:118771088-118783212   CU442720,CH242-94F19,6:118759178-118889484
(Clone quality: bE94F19 on chr=6; Num_of_Contigs=3; )
PRDX2 ENSSSCG00000013736 2:56062674-56066310   CU914382,CH242-275M24,2:56025074-56111468
(Clone quality: bE275M24 on chr=2; Num_of_Contigs=7; )
PRDX3 ENSSSCG00000005135 1:209618709-209668877   CU582802,CH242-276P14,1:209585174-209748628
(Clone quality: bE276P14 on chr=1; Num_of_Contigs=1; )
PRDX3 ENSSSCG00000010682 14:135062827-135073820    
PRDX4   ENSSSCG00000012171 X:18634358-18653742   CU462995,CH242-81M14,X:18562318-18677937
(Clone quality: bE81M14 on chr=X; Num_of_Contigs=4; )
PRDX5 ENSSSCG00000013030 2:6170436-6173823   CU861533,CH242-1H13,2:6169679-6176765
(Clone quality: bE1H13 on chr=2; Num_of_Contigs=14; )
PRDX6   ENSSSCG00000015490 9:108779722-108783068   FP089545,CH242-181N7,9:108775072-108784220
(Clone quality: bE181N7 on chr=9; Num_of_Contigs=5; )
PREB   ENSSSCG00000008553 3:104428646-104432250   CU896571,CH242-143O19,3:104398046-104492436
(Clone quality: bE143O19 on chr=3; Num_of_Contigs=6; )
PRELID1 ENSSSCG00000014042 2:69747970-69752516 CU915382,CH242-167E23,2:69697156-69852996
(Clone quality: bE167E23 on chr=2; Num_of_Contigs=8; ) 		 
PRELID2   ENSSSCG00000014406 2:133464789-133485533   FP236415,CH242-37G8,2:133439694-133496384
(Clone quality: bE37G8 on chr=2; Num_of_Contigs=5; )
PRELP ENSSSCG00000015271 9:61929161-61934298   CU466494,CH242-478D23,9:61895916-61982932
(Clone quality: bE478D23 on chr=9; Num_of_Contigs=6; )
PREP   ENSSSCG00000004368 1:75036691-75170752    
PREPL   ENSSSCG00000008448 3:89474545-89536557    
PREX2   ENSSSCG00000006199 4:69212022-69424562    
PRF1 ENSSSCG00000010271 14:76667277-76671604   CT827802,CH242-224L10,14:76656698-76735939
(Clone quality: bE224L10 on chr=14; Num_of_Contigs=2; )
PRG2 ENSSSCG00000008655 3:121265240-121274481   FP102317,CH242-206A23,3:121263634-121296355
(Clone quality: bE206A23 on chr=3; Num_of_Contigs=8; )
PRHOXNB   ENSSSCG00000009316 11:4864555-4873056    
PRICKLE1   ENSSSCG00000000794 5:69776633-69952508    
PRICKLE2   ENSSSCG00000011495 13:38479159-38643037    
PRICKLE3   ENSSSCG00000012293 X:42684489-42696320   FP067404,CH242-247J8,X:42680766-42706990
(Clone quality: bE247J8 on chr=X; Num_of_Contigs=5; )
PRIM1   ENSSSCG00000000408 5:21142224-21156544   CU468457,CH242-203P23,5:21129279-21156977
(Clone quality: bE203P23 on chr=5; Num_of_Contigs=4; )
PRIM2   ENSSSCG00000001493 7:32611231-32963336    
PRIMA1   ENSSSCG00000002464 7:123366370-123445557    
PRKAA1   ENSSSCG00000016858 16:23126720-23134109   CU928705,CH242-505A11,16:23038458-23135687
(Clone quality: bE505A11 on chr=16; Num_of_Contigs=2; )
PRKAA2   ENSSSCG00000003837 6:110603615-110674680    
PRKAB1   ENSSSCG00000009840 14:33237945-33252263   CT737295,CH242-206D4,14:33142163-33293136
(Clone quality: bE206D4 on chr=14; Num_of_Contigs=1; )
PRKAB2 ENSSSCG00000006703 4:104491275-104503277   FP085517,CH242-271H18,4:104442547-104562336
(Clone quality: bE271H18 on chr=4; Num_of_Contigs=2; )
PRKAB2 ENSSSCG00000006703 4:104491275-104503277   FP085517,CH242-271H18,4:104442547-104562336
(Clone quality: bE271H18 on chr=4; Num_of_Contigs=2; )
PRKACA ENSSSCG00000013771 2:57071837-57092296   FP086609,CH242-184K22,2:57071290-57093017
(Clone quality: bE184K22 on chr=2; Num_of_Contigs=6; )
PRKAG1 ENSSSCG00000000185 5:13657225-13859223    
PRKAG2   ENSSSCG00000016432 18:4683541-4951931    
PRKAG3 ENSSSCG00000016200 15:113847350-113850814   CU914509,CH242-30J4,15:113846889-113851528
(Clone quality: bE30J4 on chr=15; Num_of_Contigs=25; )
PRKAR1A ENSSSCG00000017259 12:9945110-9961471   FP085458,CH242-238J2,12:9943590-10107358
(Clone quality: bE238J2 on chr=12; Num_of_Contigs=2; )
PRKAR1B   ENSSSCG00000007542 3:42726-114645    
PRKAR2A ENSSSCG00000011363 13:26302044-26391518    
PRKAR2B   ENSSSCG00000015439 9:100055953-100144799    
PRKCA ENSSSCG00000000114 5:6364735-6381115   CU633351,CH242-161B9,5:6340838-6445691
(Clone quality: bE161B9 on chr=5; Num_of_Contigs=5; )
Go to records:
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Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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