A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Records 9501 - 9600:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
PTPRC ENSSSCG00000010908 10:22721069-22743562   FP067416,CH242-483G3,10:22720837-22744862
(Clone quality: bE483G3 on chr=10; Num_of_Contigs=5; )
PTPRC ENSSSCG00000012909 2:3468942-3469568   CU633429,CH242-6G2,2:3468458-3486670
(Clone quality: bE6G2 on chr=2; Num_of_Contigs=8; )
PTPRD ENSSSCG00000005194 1:223065120-223220583   CU633291,CH242-39J23,1:223061699-223239324
(Clone quality: bE39J23 on chr=1; Num_of_Contigs=1; )
PTPRF ENSSSCG00000000549 5:44608561-44658126    
PTPRF ENSSSCG00000000940 5:94410183-94547079   CU633642,CH242-167I17,5:94386592-94554001
(Clone quality: bE167I17 on chr=5; Num_of_Contigs=1; )
PTPRF ENSSSCG00000003938 6:119905206-119951284    
PTPRF ENSSSCG00000012866 2:1411757-1420165    
PTPRF ENSSSCG00000014598 9:1352429-1460845    
PTPRF ENSSSCG00000015474 9:106759290-106794554    
PTPRF ENSSSCG00000016781 16:2980222-3204046    
PTPRG   ENSSSCG00000011485 13:36945056-37093057    
PTPRH   ENSSSCG00000013220 2:12585454-12608690    
PTPRK   ENSSSCG00000004209 1:36404866-36761816    
PTPRN   ENSSSCG00000016218 15:114325915-114345774   CU457453,CH242-470M7,15:114314554-114348461
(Clone quality: bE470M7 on chr=15; Num_of_Contigs=11; )
PTPRO   ENSSSCG00000000601 5:54469066-54516196   CU655983,CH242-226N9,5:54333462-54523626
(Clone quality: bE226N9 on chr=5; Num_of_Contigs=1; )
PTPRU ENSSSCG00000003590 6:59035952-59100679    
PTPRZ1   ENSSSCG00000016614 18:23204383-23291497 CU463080,CH242-269N20,18:23159073-23362655
(Clone quality: bE269N20 on chr=18; Num_of_Contigs=11; ) 		 
PTRF ENSSSCG00000017404 12:18032859-18045443   CU914191,CH242-236G5,12:18025552-18052509
(Clone quality: bE236G5 on chr=12; Num_of_Contigs=14; )
PTRH2   ENSSSCG00000017667 12:34060420-34060959   CU639474,CH242-173P3,12:34030800-34165605
(Clone quality: bE173P3 on chr=12; Num_of_Contigs=2; )
PTS   ENSSSCG00000015040 9:38870948-38878481   CU657951,CH242-322L21,9:38838246-38903616
(Clone quality: bE322L21 on chr=9; Num_of_Contigs=9; )
PTX3 ENSSSCG00000011727 13:77150724-77156269   CU633549,CH242-178L15,13:77122444-77202872
(Clone quality: bE178L15 on chr=13; Num_of_Contigs=4; )
PUM1   ENSSSCG00000003591 6:59768386-59817202    
PUM2   ENSSSCG00000008600 3:109490435-109567035    
PUNC ENSSSCG00000004931 1:170390013-170403202   CU633232,CH242-191H9,1:170387390-170434800
(Clone quality: bE191H9 on chr=1; Num_of_Contigs=6; )
PUNC ENSSSCG00000004932 1:170410018-170452342    
PURB   ENSSSCG00000016739 18:49099009-49099707    
PUS1   ENSSSCG00000009741 14:23282353-23300172   CU469318,CH242-114E11,14:23178600-23358435
(Clone quality: bE114E11 on chr=14; Num_of_Contigs=2; )
PUS10   ENSSSCG00000008385 3:74320412-74573966    
PUS7   ENSSSCG00000015428 9:98413133-98584731    
PUSL1   ENSSSCG00000003338 6:42905835-42908845    
PVALB ENSSSCG00000000138 5:7325480-7342788   CU407327,CH242-127L5,5:7317383-7358806
(Clone quality: bE127L5 on chr=5; Num_of_Contigs=4; )
PVR ENSSSCG00000003079 6:35616165-35627447   CU929755,CH242-284D18,6:35587258-35702275
(Clone quality: bE284D18 on chr=6; Num_of_Contigs=4; )
PVRIG   ENSSSCG00000007656 3:6594341-6596393   CU464007,CH242-351O3,3:6593493-6614733
(Clone quality: bE351O3 on chr=3; Num_of_Contigs=5; )
PVRL1 ENSSSCG00000015124 9:45499515-45554433    
PVRL2 ENSSSCG00000003090 6:35908889-35947716    
PVRL3 ENSSSCG00000011933 13:111141197-111166125   CU914400,CH242-126E9,13:111116261-111220774
(Clone quality: bE126E9 on chr=13; Num_of_Contigs=5; )
PVRL4 ENSSSCG00000006368 4:92863024-92879047   CU463216,CH242-293N2,4:92861165-92884929
(Clone quality: bE293N2 on chr=4; Num_of_Contigs=6; )
PWP1   ENSSSCG00000000161 5:10888863-10917072    
PWWP2A   ENSSSCG00000017038 16:61047681-61048286   FP085377,CH242-270A12,16:61022156-61080268
(Clone quality: bE270A12 on chr=16; Num_of_Contigs=2; )
PX19 ENSSSCG00000014042 2:69747970-69752516 CU915382,CH242-167E23,2:69697156-69852996
(Clone quality: bE167E23 on chr=2; Num_of_Contigs=8; ) 		 
PXDN ENSSSCG00000008655 3:121265240-121274481   FP102317,CH242-206A23,3:121263634-121296355
(Clone quality: bE206A23 on chr=3; Num_of_Contigs=8; )
PXMP3   ENSSSCG00000006168 4:61490446-61491363   CU179688,CH242-247C7,4:61462207-61516774
(Clone quality: bE247C7 on chr=4; Num_of_Contigs=6; )
PXMP4   ENSSSCG00000007269 17:39122979-39135792   CU407167,CH242-230G19,17:39116497-39141577
(Clone quality: bE230G19 on chr=17; Num_of_Contigs=9; )
PXN ENSSSCG00000008655 3:121265240-121274481   FP102317,CH242-206A23,3:121263634-121296355
(Clone quality: bE206A23 on chr=3; Num_of_Contigs=8; )
PXR ENSSSCG00000011890 13:104974812-104979179   CU464151,CH242-19K1,13:104974384-104979421
(Clone quality: bE19K1 on chr=13; Num_of_Contigs=7; )
PYCARD ENSSSCG00000007758 3:15810753-15812359   CU464163,CH242-418M3,3:15802333-15893853
(Clone quality: bE418M3 on chr=3; Num_of_Contigs=3; )
PYCR2   ENSSSCG00000010855 10:14043653-14047760   CU914379,CH242-206B3,10:14028575-14068754
(Clone quality: bE206B3 on chr=10; Num_of_Contigs=3; )
PYCRL   ENSSSCG00000006952 4:135892287-135892760   CU927913,CH242-99E21,4:135892216-135896942
(Clone quality: bE99E21 on chr=4; Num_of_Contigs=20; )
PYGL   ENSSSCG00000005024 1:188921305-188980280    
PYGM   ENSSSCG00000013022 2:5810420-5821868    
PYGO1   ENSSSCG00000004607 1:121043815-121046372   CU570857,CH242-45M3,1:121035192-121118131
(Clone quality: bE45M3 on chr=1; Num_of_Contigs=5; )
PYGO2   ENSSSCG00000006540 4:98937927-98940465   CU207227,CH242-365J2,4:98889060-98947503
(Clone quality: bE365J2 on chr=4; Num_of_Contigs=9; )
PYROXD1   ENSSSCG00000000583 5:50063752-50076553    
PYROXD2   ENSSSCG00000010533 14:114405275-114429579    
PYY ENSSSCG00000017363 12:17013175-17014427   CU469063,CH242-86P22,12:17005106-17017395
(Clone quality: bE86P22 on chr=12; Num_of_Contigs=21; )
PYY ENSSSCG00000017369 12:17142714-17143966   CU914436,CH242-507H4,12:17130148-17144522
(Clone quality: bE507H4 on chr=12; Num_of_Contigs=9; )
Q8N682 ENSSSCG00000000861 5:77645610-77663463   CU896609,CH242-347A3,5:77643302-77664475
(Clone quality: bE347A3 on chr=5; Num_of_Contigs=12; )
Q8TC26 ENSSSCG00000015700 15:15543730-15915160    
QARS   ENSSSCG00000011374 13:26666151-26673660   CU856115,CH242-45E6,13:26664108-26688116
(Clone quality: bE45E6 on chr=13; Num_of_Contigs=7; )
QKI   ENSSSCG00000004029 1:5590141-5695970    
QPCT   ENSSSCG00000008491 3:95934715-95960054    
QRFP   ENSSSCG00000005705 1:285996931-285997335 FP102068,CH242-374C22,1:285992963-286044374
(Clone quality: bE374C22 on chr=1; Num_of_Contigs=5; ) 		 
QRFPR   ENSSSCG00000009098 8:88401685-88412290   FP067390,CH242-65L9,8:88389348-88422597
(Clone quality: bE65L9 on chr=8; Num_of_Contigs=15; )
QRICH1   ENSSSCG00000011373 13:26614083-26664957    
QRSL1   ENSSSCG00000004374 1:76217431-76246690    
QSER1   ENSSSCG00000013314 2:26292906-26334078 CU928434,CH242-212M21,2:26147327-26334640
(Clone quality: bE212M21 on chr=2; Num_of_Contigs=7; ) 		 
QSOX1   ENSSSCG00000015535 9:114246490-114289285    
QTRT1   ENSSSCG00000013637 2:52796936-52817795    
QTRTD1   ENSSSCG00000011912 13:108808713-108846483    
R2 ENSSSCG00000000233 5:16023608-16057075   CU606912,CH242-90A20,5:16023396-16077450
(Clone quality: bE90A20 on chr=5; Num_of_Contigs=3; )
R2 ENSSSCG00000005229 1:229342181-229362574   CU467086,CH242-311M15,1:229299527-229373820
(Clone quality: bE311M15 on chr=1; Num_of_Contigs=4; )
R2 ENSSSCG00000005377 1:251656031-251915759    
R2 ENSSSCG00000009657 14:10337015-10424743    
R2 ENSSSCG00000010989 10:31508071-31523087   CU633320,CH242-86P2,10:31485466-31523504
(Clone quality: bE86P2 on chr=10; Num_of_Contigs=12; )
R3HDM1   ENSSSCG00000015692 15:14531850-14666814    
R3HDML   ENSSSCG00000007370 17:48477364-48486996    
RAB10   ENSSSCG00000008573 3:105388346-105468269   CU571288,CH242-32P1,3:105305392-105483350
(Clone quality: bE32P1 on chr=3; Num_of_Contigs=1; )
RAB11A ENSSSCG00000004940 1:170984851-170998658    
RAB11B   ENSSSCG00000013600 2:51678226-51689604   FP090904,CH242-212F1,2:51608045-51700090
(Clone quality: bE212F1 on chr=2; Num_of_Contigs=2; )
RAB11FIP1   ENSSSCG00000015823 15:46024628-46055647    
RAB11FIP2   ENSSSCG00000010672 14:133950706-133989057   CU062550,CH242-292M14,14:133889135-134049376
(Clone quality: bE292M14 on chr=14; Num_of_Contigs=1; )
RAB11FIP3   ENSSSCG00000007994 3:35607368-35662467    
RAB11FIP4   ENSSSCG00000017747 12:41149764-41187475    
RAB13 ENSSSCG00000000118 5:6481483-6507276    
RAB13 ENSSSCG00000006564 4:99933215-99938033   CU407290,CH242-513B13,4:99899068-99941551
(Clone quality: bE513B13 on chr=4; Num_of_Contigs=7; )
RAB14   ENSSSCG00000005514 1:274928809-274955608    
RAB15   ENSSSCG00000002280 7:97559082-97563430   FP236589,CH242-419H20,7:97557190-97566264
(Clone quality: bE419H20 on chr=7; Num_of_Contigs=10; )
RAB17   ENSSSCG00000016328 15:129652446-129663911    
RAB18 ENSSSCG00000009897 14:40272495-40287691   CU062612,CH242-93C5,14:40150672-40322842
(Clone quality: bE93C5 on chr=14; Num_of_Contigs=2; )
RAB19   ENSSSCG00000016499 18:7783366-7786848   CU655865,CH242-334M24,18:7775821-7788399
(Clone quality: bE334M24 on chr=18; Num_of_Contigs=7; )
RAB1A   ENSSSCG00000008359 3:70732426-70763760   CU928819,CH242-253B13,3:70717646-70769112
(Clone quality: bE253B13 on chr=3; Num_of_Contigs=2; )
RAB20   ENSSSCG00000009546 11:77468650-77468946   CU041289,CH242-99E18,11:77465892-77469064
(Clone quality: bE99E18 on chr=11; Num_of_Contigs=10; )
RAB21 ENSSSCG00000000511 5:34829275-34858125   CU457452,CH242-42A3,5:34825075-34887860
(Clone quality: bE42A3 on chr=5; Num_of_Contigs=4; )
RAB22A   ENSSSCG00000007513 17:61117820-61168310 CT009685,CH242-172A22,17:61076185-61204463
(Clone quality: bE172A22 on chr=17; Num_of_Contigs=3; ) 		 
RAB23   ENSSSCG00000001495 7:33056076-33072116    
RAB24   ENSSSCG00000014043 2:69752584-69754802 CU915382,CH242-167E23,2:69697156-69852996
(Clone quality: bE167E23 on chr=2; Num_of_Contigs=8; ) 		 
RAB25   ENSSSCG00000006498 4:97907394-97916970   CU302298,CH242-261P14,4:97896859-97936068
(Clone quality: bE261P14 on chr=4; Num_of_Contigs=4; )
RAB26   ENSSSCG00000008042 3:36513934-36518615   FP102350,CH242-207G4,3:36503076-36556623
(Clone quality: bE207G4 on chr=3; Num_of_Contigs=8; )
RAB27A ENSSSCG00000004612 1:121265136-121337539    
RAB27B   ENSSSCG00000004533 1:107249691-107261492   CU469481,CH242-280O12,1:107132216-107314734
(Clone quality: bE280O12 on chr=1; Num_of_Contigs=1; )
Go to records:
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Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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