From zhu iastate.edu Mon May 15 16:40:14 2006
Date: Mon, 15 May 2006 16:40:20 -0500
From: Zhiliang Hu <zhuiastate.edu>
Subject: What's new on the NAGRP animal genome web site (#2,
2006)
To: Multiple Recipients of <angenmapanimalgenome.org>
What's new on the NAGRP animal genome web site (#2, 2006):
o The Cattle genome information web site is re-designed and updated
http://www.animalgenome.org/cattle/
o A set of a few new tools are made public for free use:
- Sequence alignment drawing tool
http://www.animalgenome.org/cgi-bin/util/lined
- Reverse compliment sequences converter
http://www.animalgenome.org/cgi-bin/util/revc
- Prim2 - design primers on the consensus of 2 similar sequences
http://www.animalgenome.org/~hu/expeditor/prim2
o A GO terms classification counter tool has its beta release to public
(A new "Questions and Answers" section are added as a user guide)
http://www.animalgenome.org/...oinfo/tools/countgo/
You can also find it through the Gene Ontology "GO Tools" list from
http://www.geneontology.org/
o New features are added to report swine genome sequencing progress.
http://www.animalgenome.org/...pigs/genomesequence/
o An Animal Trait Ontology (ATO) Editor by Jie Bao et al. is
released for free download:
http://www.animalgenome.org/...ioinfo/projects/ATO/
Those who are interested in joining ATO development activities
please contact: bioinfo-teamanimalgenome.org
o The NAGRP Bioinformatics coordination web site has an extensive update
(many pages were updated over the past a few months):
http://www.animalgenome.org/bioinfo/
o The aquagenomics community directory is modified to allow members
to upload the PDF files and keep a list of their publications:
http://www.animalgenome.org/...angenmap/aqua_dir.pl
(Users are encouraged to voice out if you wish to have this
feature available to the general or specific community).
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