DNA
Genome
Traits
Markers
Expression
Pig Genome Database
Site search:  
Ensembl Pig NCBI Pig Helpdesk
Find and download
Genome elements
Map feature alignments:
Genes, QTL, SNP, etc
Search for genes
information
Manage your
expression experiment
8,315 QTLs as of
Dec 27, 2012
Iowa Porcine Assembly
TGI, UniGen, etc
Plot trait values
on the pig genome
Comparative maps:
human, rat, cattle, etc
Blast search against
build 10 chromosomes
Tools that support
community activities
Data Repository
Correlation DB

The completion of the pig draft genome sequence marks a milestone in 20 years of pig genome studies. The Pig Genome Database (PGD) is to serve the purpose not only to bring together pig gene expression, quantitative trait loci (QTL), candidate gene, and whole genome association study (WGAS) results, but also to facilitate information integration and mining within the pig and across species.

Click on a chromosome to get a quick GBrowse view on Build 10.2:

This site was developed when the pig genome sequencing project was to roll out the first pig assembly during 2008-2012. For further progress in pig genome works, please refer to NCBI or Ensembl web sites for new updates.
Related:    AgBase    Arkdb    BGI    Ensembl    NCBI    Pig breeds    PigGIS    SGSC   
This research is supported by the United States Department of Agriculture
National Animal Genome Research Pprogram
Bioinformatics Coordination Project
About the Pig Genome Database

 

© 2003-2024: USA · USDA · NRPSP8 · Program to Accelerate Animal Genomics Applications. Contact: Bioinformatics Team