A Compilation of Raw Pig SNP Data (2008)
— Select Candidates for a Pig SNP Chip

  1. Compiled SNP data, version 1 (May 21, 2008)

    2. Data Info

    Source: ftp://ftp.ncbi.nih.gov/snp/organisms/pig_9823/rs_fasta/rs_chNotOn.fas.gz
Status: 8,427 SNPs were loaded to database (May 11, 2008)
        SNP quality scores developed (May 20, 2008)
  2. Compiled SNP data, version 2 (July 31, 2008)

    3. Data statistics (click to expand/ hide)

    Data source and process status (click to expand/ hide)

    Data Download (Tab delimited data file with README)

· Download
This work contributed to the making of the 60K pig SNP chip (see: Design of a High Density SNP Genotyping Assay in the Pig Using SNPs Identified and Characterized by Next Generation Sequencing Technology. PLoS ONE 4(8) by Ramos et al.

 

© 2003-2025: USA · USDA · NRPSP8 · Program to Accelerate Animal Genomics Applications. Contact: Bioinformatics Team