Genetic nomenclature

Livestock Animals Standardized Genetics Nomenclature

Standardized Bovine Gene Names — assigned based on human gene nomenclature
Manual data provided by BGD via community annotation. This data is supplemented with HGNC nomenclature transferred to bovine genes based upon strict orthology between the two species (Last updated: 04 March 2013).	Search:

[ADAM3A] — ADAM Metallopeptidase Domain 3A (NCBI Gene:100048949); Ortholog support evidence: HGNC:209; Evola(H-InvDB); Human gene: 1587;
[DEFB124] — Defensin, Beta 124 (NCBI Gene:100113475); Ortholog support evidence: HGNC:18104; Ensembl, Evola(H-InvDB), Homologene, Inparanoid, OMA, OrthoDB, Treefam; Human gene: 245937;
[NCBP1] — Nuclear Cap Binding Protein Subunit 1, 80kDa (NCBI Gene:100124428); Ortholog support evidence: HGNC:7658; Ensembl, Evola(H-InvDB), Homologene, OMA, OrthoDB, Treefam; Human gene: 4686;
[ARHGAP4] — Rho GTPase Activating Protein 4 (NCBI Gene:100124430); Ortholog support evidence: HGNC:674; Ensembl, Homologene, OMA; Human gene: 393;
[DUSP27] — Dual Specificity Phosphatase 27 (putative) (NCBI Gene:100124500); Ortholog support evidence: HGNC:25034; Ensembl, Homologene, Inparanoid, OMA, OrthoDB, Treefam; Human gene: 92235;
[FAM46D] — Family With Sequence Similarity 46, Member D (NCBI Gene:100124506); Ortholog support evidence: HGNC:28399; Ensembl, Homologene, OMA; Human gene: 169966;
[LIG1] — Ligase I, DNA, ATP-dependent (NCBI Gene:100124507); Ortholog support evidence: HGNC:6598; Ensembl, Homologene, OMA, Treefam; Human gene: 3978;
[BAP1] — BRCA1 Associated Protein-1 (ubiquitin Carboxy-terminal Hydrolase) (NCBI Gene:100124510); Ortholog support evidence: HGNC:950; Ensembl, Homologene, OMA; Human gene: 8314;
[NKRF] — NFKB Repressing Factor (NCBI Gene:100124519); Ortholog support evidence: HGNC:19374; Ensembl, Homologene, OMA; Human gene: 55922;
[GNAL] — Guanine Nucleotide Binding Protein (G Protein), Alpha Activating Activity Polypeptide, Olfactory Type (NCBI Gene:100124520); Ortholog support evidence: HGNC:4388; Ensembl, Evola(H-InvDB), Homologene, Inparanoid, OMA, Treefam; Human gene: 2774;
[INTS8] — Integrator Complex Subunit 8 (NCBI Gene:100124522); Ortholog support evidence: HGNC:26048; Ensembl, Evola(H-InvDB), Homologene, Inparanoid, OMA, OrthoDB, Treefam; Human gene: 55656;
[GPRASP2] — G Protein-coupled Receptor Associated Sorting Protein 2 (NCBI Gene:100124524); Ortholog support evidence: HGNC:25169; Ensembl, Evola(H-InvDB), Homologene, OMA; Human gene: 114928;
[CX3CR1] — Chemokine (C-X3-C Motif) Receptor 1 (NCBI Gene:100124525); Ortholog support evidence: HGNC:2558; Ensembl, Evola(H-InvDB), Homologene, Inparanoid, OMA, OrthoDB, PhylomeDB, Treefam; Human gene: 1524;
[UBAP2L] — Ubiquitin Associated Protein 2-like (NCBI Gene:100125221); Ortholog support evidence: HGNC:29877; Ensembl, Evola(H-InvDB), Homologene, Inparanoid, OMA, OrthoDB, Treefam; Human gene: 9898;
[OTP] — Orthopedia Homeobox (NCBI Gene:100125232); Ortholog support evidence: HGNC:8518; Homologene, Treefam; Human gene: 23440;
[STAU2] — Staufen, RNA Binding Protein, Homolog 2 (NCBI Gene:100125233); Ortholog support evidence: HGNC:11371; Ensembl, Homologene, Treefam; Human gene: 27067;
[CCDC96] — Coiled-coil Domain Containing 96 (NCBI Gene:100125235); Ortholog support evidence: HGNC:26900; Ensembl, Homologene, OMA; Human gene: 257236;
[PTPLAD1] — Protein Tyrosine Phosphatase-like A Domain Containing 1 (NCBI Gene:100125237); Ortholog support evidence: HGNC:24175; Ensembl, Evola(H-InvDB), Homologene, Inparanoid, OMA, OrthoDB, Treefam; Human gene: 51495;
[ERCC2] — Excision Repair Cross-complementing Rodent Repair Deficiency, Complementation Group 2 (NCBI Gene:100125238); Ortholog support evidence: HGNC:3434; Ensembl, Evola(H-InvDB), Homologene, OrthoDB, Treefam; Human gene: 2068;
[PLN] — Phospholamban (NCBI Gene:100125240); Ortholog support evidence: HGNC:9080; Ensembl, Evola(H-InvDB), Homologene, Inparanoid, OMA, PhylomeDB, Treefam; Human gene: 5350;
[GALNT4] — UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 4 (GalNAc-T4) (NCBI Gene:100125265); Ortholog support evidence: HGNC:4126; Homologene; Human gene: 8693;
[CDHR5] — Cadherin-related Family Member 5 (NCBI Gene:100125282); Ortholog support evidence: HGNC:7521; Ensembl, Homologene, OMA; Human gene: 53841;
[SNX21] — Sorting Nexin Family Member 21 (NCBI Gene:100125285); Ortholog support evidence: HGNC:16154; Evola(H-InvDB), Homologene; Human gene: 90203;
[ATRIP] — ATR Interacting Protein (NCBI Gene:100125287); Ortholog support evidence: HGNC:33499; Ensembl, Homologene, Inparanoid, OMA, OrthoDB, Treefam; Human gene: 84126;
[EME1] — Essential Meiotic Endonuclease 1 Homolog 1 (NCBI Gene:100125299); Ortholog support evidence: HGNC:24965; Ensembl, Inparanoid, OMA, OrthoDB, Treefam; Human gene: 146956;
[CCDC157] — Coiled-coil Domain Containing 157 (NCBI Gene:100125300); Ortholog support evidence: HGNC:33854; Ensembl, Evola(H-InvDB), Homologene, Inparanoid, OrthoDB; Human gene: 550631;
[TMEM8B] — Transmembrane Protein 8B (NCBI Gene:100125302); Ortholog support evidence: HGNC:21427; Ensembl, Evola(H-InvDB), Homologene, OrthoDB, Treefam; Human gene: 51754;
[GRTP1] — Growth Hormone Regulated TBC Protein 1 (NCBI Gene:100125303); Ortholog support evidence: HGNC:20310; Ensembl, Evola(H-InvDB), Homologene, Inparanoid, OMA, OrthoDB, Treefam; Human gene: 79774;
[COG5] — Component Of Oligomeric Golgi Complex 5 (NCBI Gene:100125306); Ortholog support evidence: HGNC:14857; Ensembl, Evola(H-InvDB), Homologene, Inparanoid, OMA, OrthoDB; Human gene: 10466;
[METTL21B] — Methyltransferase Like 21B (NCBI Gene:100125307); Ortholog support evidence: HGNC:24936; Ensembl, Evola(H-InvDB), Homologene, Inparanoid, OMA, OrthoDB, PhylomeDB, Treefam; Human gene: 25895;
[B3GALNT2] — Beta-1,3-N-acetylgalactosaminyltransferase 2 (NCBI Gene:100125310); Ortholog support evidence: HGNC:28596; Ensembl, Evola(H-InvDB), Homologene, Inparanoid, OMA, OrthoDB, Treefam; Human gene: 148789;
[ALG12] — Asparagine-linked Glycosylation 12, Alpha-1,6-mannosyltransferase Homolog (NCBI Gene:100125314); Ortholog support evidence: HGNC:19358; Ensembl, Homologene, OMA; Human gene: 79087;
[IK] — IK Cytokine, Down-regulator Of HLA II (NCBI Gene:100125318); Ortholog support evidence: HGNC:5958; Ensembl, Evola(H-InvDB), Homologene, Inparanoid, OMA, OrthoDB, Treefam; Human gene: 3550;
[TPRN] — Taperin (NCBI Gene:100125320); Ortholog support evidence: HGNC:26894; Ensembl, Homologene; Human gene: 286262;
[ZNF891] — Zinc Finger Protein 891 (NCBI Gene:100125388); Ortholog support evidence: HGNC:38709; Evola(H-InvDB), OMA, OrthoDB; Human gene: 440122;
[ZNF554] — Zinc Finger Protein 554 (NCBI Gene:100125579); Ortholog support evidence: HGNC:26629; Ensembl, Evola(H-InvDB), Homologene, OMA; Human gene: 115196;
[IRF7] — Interferon Regulatory Factor 7 (NCBI Gene:100125591); Ortholog support evidence: HGNC:6122; Ensembl, Homologene, OMA; Human gene: 3665;
[TLCD1] — TLC Domain Containing 1 (NCBI Gene:100125601); Ortholog support evidence: HGNC:25177; Ensembl, Evola(H-InvDB), Homologene, Inparanoid, OMA, OrthoDB, Treefam; Human gene: 116238;
[DPP7] — Dipeptidyl-peptidase 7 (NCBI Gene:100125760); Ortholog support evidence: HGNC:14892; Ensembl, Homologene; Human gene: 29952;
[NREP] — Neuronal Regeneration Related Protein Homolog (rat) (NCBI Gene:100125763); Ortholog support evidence: HGNC:16834; Ensembl, Homologene, Inparanoid, PhylomeDB, Treefam; Human gene: 9315;
[SERPIND1] — Serpin Peptidase Inhibitor, Clade D (heparin Cofactor), Member 1 (NCBI Gene:100125764); Ortholog support evidence: HGNC:4838; Ensembl, Homologene, Inparanoid, OMA, OrthoDB, PhylomeDB, Treefam; Human gene: 3053;
[IGSF1] — Immunoglobulin Superfamily, Member 1 (NCBI Gene:100125775); Ortholog support evidence: HGNC:5948; Ensembl, OMA; Human gene: 3547;
[RERGL] — RERG/RAS-like (NCBI Gene:100125833); Ortholog support evidence: HGNC:26213; Ensembl, Homologene, Inparanoid, OMA, OrthoDB; Human gene: 79785;
[PCYOX1] — Prenylcysteine Oxidase 1 (NCBI Gene:100125835); Ortholog support evidence: HGNC:20588; Ensembl, Evola(H-InvDB), Homologene, Inparanoid, OMA, OrthoDB, Treefam; Human gene: 51449;
[WDR5] — WD Repeat Domain 5 (NCBI Gene:100125836); Ortholog support evidence: HGNC:12757; Ensembl, Homologene, OMA; Human gene: 11091;
[POLR2M] — Polymerase (RNA) II (DNA Directed) Polypeptide M (NCBI Gene:100125877); Ortholog support evidence: HGNC:14862; Ensembl, Homologene; Human gene: 81488;
[KAT8] — K(lysine) Acetyltransferase 8 (NCBI Gene:100125883); Ortholog support evidence: HGNC:17933; Ensembl, Evola(H-InvDB), Homologene, Inparanoid, OMA, OrthoDB, PhylomeDB, Treefam; Human gene: 84148;
[NT5DC1] — 5'-nucleotidase Domain Containing 1 (NCBI Gene:100125914); Ortholog support evidence: HGNC:21556; Ensembl, Evola(H-InvDB), Homologene, Inparanoid, OMA, OrthoDB, PhylomeDB, Treefam; Human gene: 221294;
[RFXANK] — Regulatory Factor X-associated Ankyrin-containing Protein (NCBI Gene:100125917); Ortholog support evidence: HGNC:9987; Ensembl, Evola(H-InvDB), Homologene, OMA, Treefam; Human gene: 8625;
[NPDC1] — Neural Proliferation, Differentiation And Control, 1 (NCBI Gene:100125919); Ortholog support evidence: HGNC:7899; Ensembl, Homologene; Human gene: 56654;
[CCDC54] — Coiled-coil Domain Containing 54 (NCBI Gene:100125920); Ortholog support evidence: HGNC:30703; Ensembl, Homologene, OMA, PhylomeDB; Human gene: 84692;
[TMEM9] — Transmembrane Protein 9 (NCBI Gene:100125921); Ortholog support evidence: HGNC:18823; Ensembl, Homologene; Human gene: 252839;
[RER1] — RER1 Retention In Endoplasmic Reticulum 1 Homolog (NCBI Gene:100125922); Ortholog support evidence: HGNC:30309; Ensembl, Evola(H-InvDB), Homologene, Inparanoid, OMA, OrthoDB, Treefam; Human gene: 11079;
[PDCD6] — Programmed Cell Death 6 (NCBI Gene:100125927); Ortholog support evidence: HGNC:8765; Ensembl, Homologene, OMA; Human gene: 10016;
[HILPDA] — Hypoxia Inducible Lipid Droplet-associated (NCBI Gene:100125928); Ortholog support evidence: HGNC:28859; Evola(H-InvDB), Inparanoid, OrthoDB; Human gene: 29923;
[SNX22] — Sorting Nexin 22 (NCBI Gene:100125937); Ortholog support evidence: HGNC:16315; Ensembl, Evola(H-InvDB), Homologene, OMA, PhylomeDB, Treefam; Human gene: 79856;
[UBFD1] — Ubiquitin Family Domain Containing 1 (NCBI Gene:100125938); Ortholog support evidence: HGNC:30565; Ensembl, Homologene; Human gene: 56061;
[THOC6] — THO Complex 6 Homolog (NCBI Gene:100125940); Ortholog support evidence: HGNC:28369; Ensembl, Evola(H-InvDB), Homologene, Inparanoid, OMA, OrthoDB, PhylomeDB, Treefam; Human gene: 79228;
[CLRN3] — Clarin 3 (NCBI Gene:100125941); Ortholog support evidence: HGNC:20795; Ensembl, Homologene, OMA; Human gene: 119467;
[TTC9B] — Tetratricopeptide Repeat Domain 9B (NCBI Gene:100125944); Ortholog support evidence: HGNC:26395; Ensembl, Homologene, OMA; Human gene: 148014;
[COPA] — Coatomer Protein Complex, Subunit Alpha (NCBI Gene:100126041); Ortholog support evidence: HGNC:2230; Ensembl, Evola(H-InvDB), Homologene, OMA, PhylomeDB, Treefam; Human gene: 1314;
[ALDH4A1] — Aldehyde Dehydrogenase 4 Family, Member A1 (NCBI Gene:100126042); Ortholog support evidence: HGNC:406; Ensembl, Evola(H-InvDB), Homologene, Inparanoid, OMA, OrthoDB, Treefam; Human gene: 8659;
[ZNF444] — Zinc Finger Protein 444 (NCBI Gene:100126046); Ortholog support evidence: HGNC:16052; Ensembl, Homologene, OMA; Human gene: 55311;
[NUDT6] — Nudix (nucleoside Diphosphate Linked Moiety X)-type Motif 6 (NCBI Gene:100126047); Ortholog support evidence: HGNC:8053; Ensembl, Evola(H-InvDB), Homologene, Inparanoid, OMA, OrthoDB, Treefam; Human gene: 11162;
[ELANE] — Elastase, Neutrophil Expressed (NCBI Gene:100126050); Ortholog support evidence: HGNC:3309; Ensembl, Homologene, OMA; Human gene: 1991;
[TMEM234] — Transmembrane Protein 234 (NCBI Gene:100126052); Ortholog support evidence: HGNC:28837; Ensembl, Evola(H-InvDB), Homologene, Inparanoid, OMA, OrthoDB, Treefam; Human gene: 56063;
[PIN4] — Protein (peptidylprolyl Cis/trans Isomerase) NIMA-interacting, 4 (parvulin) (NCBI Gene:100126055); Ortholog support evidence: HGNC:8992; Ensembl, OMA; Human gene: 5303;
[COX19] — COX19 Cytochrome C Oxidase Assembly Homolog (NCBI Gene:100126182); Ortholog support evidence: HGNC:28074; Ensembl, Homologene, Inparanoid, OMA, OrthoDB; Human gene: 90639;
[CD302] — CD302 Molecule (NCBI Gene:100126272); Ortholog support evidence: HGNC:30843; Ensembl, Homologene, OMA, OrthoDB; Human gene: 9936;
[PCP4L1] — Purkinje Cell Protein 4 Like 1 (NCBI Gene:100126444); Ortholog support evidence: HGNC:20448; Ensembl, Evola(H-InvDB), Homologene, OMA; Human gene: 654790;
[RMRP] — RNA Component Of Mitochondrial RNA Processing Endoribonuclease (NCBI Gene:100126828); Ortholog support evidence: HGNC:10031; Ensembl; Human gene: 6023;
[ZNF771] — Zinc Finger Protein 771 (NCBI Gene:100135053); Ortholog support evidence: HGNC:29653; Ensembl, Evola(H-InvDB), Homologene, Inparanoid, OMA, OrthoDB, PhylomeDB; Human gene: 51333;
[INSM1] — Insulinoma-associated 1 (NCBI Gene:100137721); Ortholog support evidence: HGNC:6090; Ensembl, Homologene, OMA; Human gene: 3642;
[GTF2H4] — General Transcription Factor IIH, Polypeptide 4, 52kDa (NCBI Gene:100137723); Ortholog support evidence: HGNC:4658; Ensembl, Evola(H-InvDB), Homologene, OMA, PhylomeDB; Human gene: 2968;
[PIDD] — P53-induced Death Domain Protein (NCBI Gene:100137737); Ortholog support evidence: HGNC:16491; Ensembl, Homologene, Inparanoid, OMA, OrthoDB, Treefam; Human gene: 55367;
[COL19A1] — Collagen, Type XIX, Alpha 1 (NCBI Gene:100137749); Ortholog support evidence: HGNC:2196; Homologene; Human gene: 1310;
[ZIM3] — Zinc Finger, Imprinted 3 (NCBI Gene:100137761); Ortholog support evidence: HGNC:16366; Homologene; Human gene: 114026;
[PRDM16] — PR Domain Containing 16 (NCBI Gene:100137803); Ortholog support evidence: HGNC:14000; Ensembl, Evola(H-InvDB), Homologene, OMA, Treefam; Human gene: 63976;
[OR14C36] — Olfactory Receptor, Family 14, Subfamily C, Member 36 (NCBI Gene:100137816); Ortholog support evidence: HGNC:15026; Ensembl, Homologene; Human gene: 127066;
[ZNF114] — Zinc Finger Protein 114 (NCBI Gene:100137841); Ortholog support evidence: HGNC:12894; Ensembl, Homologene, OMA; Human gene: 163071;
[ZNF614] — Zinc Finger Protein 614 (NCBI Gene:100137855); Ortholog support evidence: HGNC:24722; Evola(H-InvDB), Homologene, Inparanoid, OMA, PhylomeDB; Human gene: 80110;
[TMPRSS12] — Transmembrane (C-terminal) Protease, Serine 12 (NCBI Gene:100137906); Ortholog support evidence: HGNC:28779; Homologene; Human gene: 283471;
[DYTN] — Dystrotelin (NCBI Gene:100137960); Ortholog support evidence: HGNC:23279; Ensembl, Homologene, OMA; Human gene: 391475;
[IAPP] — Islet Amyloid Polypeptide (NCBI Gene:100138011); Ortholog support evidence: HGNC:5329; Ensembl, Evola(H-InvDB), Homologene, Inparanoid, OMA, OrthoDB, PhylomeDB, Treefam; Human gene: 3375;
[TMCO6] — Transmembrane And Coiled-coil Domains 6 (NCBI Gene:100138035); Ortholog support evidence: HGNC:28814; Ensembl, Evola(H-InvDB), Homologene, OMA, OrthoDB; Human gene: 55374;
[ARMC10] — Armadillo Repeat Containing 10 (NCBI Gene:100138038); Ortholog support evidence: HGNC:21706; Ensembl, Evola(H-InvDB), Homologene, Inparanoid, OMA, OrthoDB, Treefam; Human gene: 83787;
[SOS2] — Son Of Sevenless Homolog 2 (NCBI Gene:100138040); Ortholog support evidence: HGNC:11188; Evola(H-InvDB), Homologene, Inparanoid, OMA, OrthoDB, Treefam; Human gene: 6655;
[TP53TG5] — TP53 Target 5 (NCBI Gene:100138069); Ortholog support evidence: HGNC:15856; Ensembl, Evola(H-InvDB), Homologene, Inparanoid, OMA, OrthoDB, PhylomeDB, Treefam; Human gene: 27296;
[HEATR7B1] — HEAT Repeat Containing 7B1 (NCBI Gene:100138072); Ortholog support evidence: HGNC:27936; Ensembl, Evola(H-InvDB), Homologene, Inparanoid, OMA, OrthoDB; Human gene: 339766;
[ZNF263] — Zinc Finger Protein 263 (NCBI Gene:100138099); Ortholog support evidence: HGNC:13056; Ensembl, Evola(H-InvDB), Homologene, Inparanoid, OMA, OrthoDB, Treefam; Human gene: 10127;
[SETDB1] — SET Domain, Bifurcated 1 (NCBI Gene:100138100); Ortholog support evidence: HGNC:10761; Ensembl, Evola(H-InvDB), Homologene, Inparanoid, OMA, OrthoDB, Treefam; Human gene: 9869;
[GCNT7] — Glucosaminyl (N-acetyl) Transferase Family Member 7 (NCBI Gene:100138125); Ortholog support evidence: HGNC:16099; Ensembl, Evola(H-InvDB), Homologene, OrthoDB, Treefam; Human gene: 140687;
[RBM12] — RNA Binding Motif Protein 12 (NCBI Gene:100138139); Ortholog support evidence: HGNC:9898; Ensembl, Homologene, OMA, OrthoDB; Human gene: 10137;
[RAD51AP2] — RAD51 Associated Protein 2 (NCBI Gene:100138156); Ortholog support evidence: HGNC:34417; Ensembl, Homologene, Inparanoid, OMA, OrthoDB; Human gene: 729475;
[SFI1] — Sfi1 Homolog, Spindle Assembly Associated (NCBI Gene:100138159); Ortholog support evidence: HGNC:29064; Ensembl, Homologene, OMA, OrthoDB, Treefam; Human gene: 9814;
[UBE2Z] — Ubiquitin-conjugating Enzyme E2Z (NCBI Gene:100138178); Ortholog support evidence: HGNC:25847; Ensembl, Evola(H-InvDB), Homologene, Inparanoid, OMA, OrthoDB, Treefam; Human gene: 65264;
[SPATA1] — Spermatogenesis Associated 1 (NCBI Gene:100138186); Ortholog support evidence: HGNC:14682; Evola(H-InvDB), Treefam; Human gene: 100505741;
[IFNK] — Interferon, Kappa (NCBI Gene:100138192); Ortholog support evidence: HGNC:21714; Ensembl, Evola(H-InvDB), Homologene, Inparanoid, OMA, OrthoDB, Treefam; Human gene: 56832;
[GIMD1] — GIMAP Family P-loop NTPase Domain Containing 1 (NCBI Gene:100138214); Ortholog support evidence: HGNC:44141; Homologene; Human gene: 100507096;
[SENP3] — SUMO1/sentrin/SMT3 Specific Peptidase 3 (NCBI Gene:100138267); Ortholog support evidence: HGNC:17862; Ensembl, Homologene, Inparanoid, OMA, OrthoDB, PhylomeDB, Treefam; Human gene: 26168;

This dataset contains 9,910 entries as of March 04, 2013; 100 rows returned.

use "Search" function on the top of this page to explore, OR

download the entire dataset here.

Data supplementary to the book:

The Genetics of the Cattle.
Edited by Dorian Garrick and Anatoly Ruvinsky. 2014, CABI Publishing, Wallingford UK.

Chapter 24: Standard Genetic Nomenclature.

by Zhi-Liang Hu, James M. Reecy, Fiona McCarthy, and Carissa A. Park.

Livestock Animals Standardized Genetics Nomenclature

Standardized Bovine Gene Names